| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01029936001 |
| Family | GT47 |
| Protein Properties | Length: 456 Molecular Weight: 52393 Isoelectric Point: 9.1873 |
| Chromosome | Chromosome/Scaffold: 8 Start: 1739902 End: 1744871 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 98 | 379 | 0 |
| LKVFMYDLPAEFHFGLLDWAPAGESVWPDIRTKFPLYPVHNSSEADVIFVPFFSSLSYNHFGKFKGRQKKNENNLLQDKLVKFLTAQEEWIRSEGRDHII MAHHPNSMLDARMKLWPAIFILSDFGRYPPNIANVGKDVIAPYKHVIKSFINDTSDFDSRPTLLYFQGAIYRKDGGFIRQELFYLLKDEKDVHFAFGNTQ GNGINKASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDVLDYSQFCIFVRTSDALKDKFLIKLIRSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 456 Download |
| MAERNASPLG FVTRNSLLCL FSVASILFIL SWLSVLRSTG RPRFIDHSLL PNSKLFAVTD 60 NGNSESQNQN DIEPSIESEE KALEGKNSVK CGSNYPVLKV FMYDLPAEFH FGLLDWAPAG 120 ESVWPDIRTK FPLYPVHNSS EADVIFVPFF SSLSYNHFGK FKGRQKKNEN NLLQDKLVKF 180 LTAQEEWIRS EGRDHIIMAH HPNSMLDARM KLWPAIFILS DFGRYPPNIA NVGKDVIAPY 240 KHVIKSFIND TSDFDSRPTL LYFQGAIYRK DGGFIRQELF YLLKDEKDVH FAFGNTQGNG 300 INKASQGMHS SKFCLNIAGD TPSSNRLFDA IASHCVPVII SDEIELPYED VLDYSQFCIF 360 VRTSDALKDK FLIKLIRSIK KDEWTRMWRR LKEVENFFEF QYPSKEGDAV QMIWQAITRK 420 VPAIRMKLHK SRRFSRSSVG RERVLNSMQL PKNFW* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-51 | 96 | 379 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33321.1 | 0 | 1 | 455 | 1 | 509 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
| EMBL | CAN68950.1 | 0 | 1 | 455 | 1 | 488 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI31205.1 | 0 | 1 | 455 | 1 | 455 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002268382.1 | 0 | 1 | 455 | 1 | 488 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319201.1 | 0 | 1 | 435 | 3 | 450 | predicted protein [Populus trichocarpa] |
