| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01030163001 |
| Family | GH5 |
| Protein Properties | Length: 472 Molecular Weight: 53352.1 Isoelectric Point: 5.1619 |
| Chromosome | Chromosome/Scaffold: 8 Start: 10916913 End: 10921854 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 83 | 417 | 9.7e-37 |
| NDKPFYVNGFNTYWLMVFAVDQSTRGKVSEVFQQAASVGLTVCRTWAFNDGQWRALQKSPSVYDEEVFKALDFVVSEARKYKIRLILSLSNNWEGYGGKA QYVKWGKEAGLNLTSDDDFFSHPTLRSYYKANVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDPTGDKLQSWIQEMVIYVKSMDPKHLLEIGLEG FYGPSTPDKVQFNPNTYAQQVGTDFIRNHQVLGVDFASVHIYTDSWISQSITEAHLDFTKSWMQAHIEDSEKYLGMPVVFGEFGVSSKDNGYNSSFRDTF ISTVYKILLNSTKKGGSGAGSLLWQLFPDGADYMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 472 Download |
| MDTYLGKLGS KIFFSVAIFM ILVQNSSSTA VEVSGDENLE TLVENVADHL SYSSSNYGVY 60 EMGDFGDEPW TMVQKKGNQF VVNDKPFYVN GFNTYWLMVF AVDQSTRGKV SEVFQQAASV 120 GLTVCRTWAF NDGQWRALQK SPSVYDEEVF KALDFVVSEA RKYKIRLILS LSNNWEGYGG 180 KAQYVKWGKE AGLNLTSDDD FFSHPTLRSY YKANVKTVLN RVNTFTNITY KEDPTIFAWE 240 LMNEPRCTSD PTGDKLQSWI QEMVIYVKSM DPKHLLEIGL EGFYGPSTPD KVQFNPNTYA 300 QQVGTDFIRN HQVLGVDFAS VHIYTDSWIS QSITEAHLDF TKSWMQAHIE DSEKYLGMPV 360 VFGEFGVSSK DNGYNSSFRD TFISTVYKIL LNSTKKGGSG AGSLLWQLFP DGADYMDDGY 420 AIVLSKSPST SNVIALQSTR LMMFNSMCAW NCRWSCHKKH PLDAFLFHDD L* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.002 | 229 | 324 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| COG2730 | BglC | 0.0001 | 112 | 424 | 334 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 1.0e-5 | 83 | 375 | 301 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 2.0e-22 | 113 | 414 | 308 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18019.1 | 0 | 1 | 471 | 1 | 471 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI18021.1 | 0 | 62 | 446 | 1 | 383 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273230.1 | 0 | 62 | 471 | 1 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002273389.1 | 0 | 62 | 471 | 1 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002528703.1 | 0 | 1 | 471 | 1 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 73 | 441 | 7 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 81 | 431 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 81 | 431 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 81 | 431 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 81 | 431 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
