| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01030165001 |
| Family | GH5 |
| Protein Properties | Length: 387 Molecular Weight: 43569 Isoelectric Point: 4.9707 |
| Chromosome | Chromosome/Scaffold: 8 Start: 10907624 End: 10911693 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 22 | 354 | 1.7e-34 |
| NGKPFYVNGFNTYWLMVFAVDQSTRGKVSEVFQQAASVGLTVCRTLAFNDGQWRALQKSPSVYDEEVFKALDFVVSEARKYKIRLILSLVNNWEGYGGKA QYVKWGKEAGLNLTSDDDFFSHPTLRSYYKANTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDPTGDKLQSWIQEMAVYVKSMDPKHLLEIGLEGFY GPSTPDKVQVNPNTYAQQVGTDFIRNHLVLGVDFASVHIYPDSWISQSITDAHLDFTRSWMQAHIEDSEKYLGMPVVFAEFGVSSEDDGYNSSFRDTLIS TVYKVLLNSTRKGGSGAGSLLWQLFPDGTDYMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 387 Download |
| MGDLGDEPWT MVQKKGNQFV VNGKPFYVNG FNTYWLMVFA VDQSTRGKVS EVFQQAASVG 60 LTVCRTLAFN DGQWRALQKS PSVYDEEVFK ALDFVVSEAR KYKIRLILSL VNNWEGYGGK 120 AQYVKWGKEA GLNLTSDDDF FSHPTLRSYY KANTVLNRVN TFTNITYKED PTIFAWELMN 180 EPRCTSDPTG DKLQSWIQEM AVYVKSMDPK HLLEIGLEGF YGPSTPDKVQ VNPNTYAQQV 240 GTDFIRNHLV LGVDFASVHI YPDSWISQSI TDAHLDFTRS WMQAHIEDSE KYLGMPVVFA 300 EFGVSSEDDG YNSSFRDTLI STVYKVLLNS TRKGGSGAGS LLWQLFPDGT DYMDDGYAIV 360 LSKSPSTSNI IALQSTRLMM FNSNFT* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.003 | 166 | 261 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 0.0001 | 22 | 312 | 298 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 5.0e-23 | 89 | 351 | 265 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18019.1 | 0 | 1 | 383 | 62 | 446 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI18021.1 | 0 | 1 | 386 | 1 | 386 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273230.1 | 0 | 1 | 383 | 1 | 385 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002273389.1 | 0 | 1 | 383 | 1 | 385 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323680.1 | 0 | 1 | 383 | 7 | 389 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 11 | 378 | 6 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 20 | 370 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 20 | 370 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 20 | 370 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 20 | 370 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT747977 | 293 | 11 | 301 | 0 |
| JK987915 | 298 | 2 | 297 | 0 |
| DY974976 | 274 | 3 | 274 | 0 |
| EL450176 | 267 | 24 | 288 | 0 |
| FK006634 | 269 | 96 | 362 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
