| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01030572001 |
| Family | GT14 |
| Protein Properties | Length: 332 Molecular Weight: 37938.4 Isoelectric Point: 7.556 |
| Chromosome | Chromosome/Scaffold: 12 Start: 6838847 End: 6843544 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 2 | 243 | 0 |
| MRTLQAVYHPRNQYILHLDLEAPPRERLDLTMSVKAEPTFREVENVRVMAQSNLVTYKGPTMIACTLQAIAILLKESLEWDWFLNLSASDYPLVTQDDLL HVFSNLSRTLNFIEHTKITGWKLNQRAKPIVIDPGLHLSKKSDIFWTTQRRSLPTSFKLFTGSAWVMLTRSFVEYCILGWDNLPRTILMYYTNFISSPEG YFHTVICNTEEFRNTAISHDLHYIAWDNPPKQHPLSLTIKDY | |||
| Full Sequence |
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| Protein Sequence Length: 332 Download |
| MMRTLQAVYH PRNQYILHLD LEAPPRERLD LTMSVKAEPT FREVENVRVM AQSNLVTYKG 60 PTMIACTLQA IAILLKESLE WDWFLNLSAS DYPLVTQDDL LHVFSNLSRT LNFIEHTKIT 120 GWKLNQRAKP IVIDPGLHLS KKSDIFWTTQ RRSLPTSFKL FTGSAWVMLT RSFVEYCILG 180 WDNLPRTILM YYTNFISSPE GYFHTVICNT EEFRNTAISH DLHYIAWDNP PKQHPLSLTI 240 KDYDKMVKSG APFARKFAKD DPVLDKIDKE LLGRINRFAP GAWCVGNSDG GADPCSVRGN 300 DSIFRSGPGA ERLQEQTQKL LSEEYQSNQC S* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 3.0e-79 | 1 | 247 | 251 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 3 | 330 | 330 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU20235.1 | 0 | 1 | 330 | 102 | 431 | unknown [Glycine max] |
| EMBL | CBI28920.1 | 0 | 1 | 331 | 1 | 331 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_192243.1 | 0 | 1 | 331 | 118 | 448 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002319376.1 | 0 | 1 | 331 | 103 | 433 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517977.1 | 0 | 1 | 331 | 109 | 439 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000001 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000001 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000001 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000001 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0000004 | 3 | 207 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FE696502 | 264 | 47 | 310 | 0 |
| CN546945 | 230 | 26 | 255 | 0 |
| DR478691 | 276 | 24 | 298 | 0 |
| ES252673 | 297 | 14 | 309 | 0 |
| DR450602 | 289 | 22 | 309 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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