| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01030642001 |
| Family | GH14 |
| Protein Properties | Length: 509 Molecular Weight: 56905.4 Isoelectric Point: 4.8132 |
| Chromosome | Chromosome/Scaffold: 12 Start: 7374750 End: 7377610 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 9 | 428 | 0 |
| YVMLPLEVVTVDNVLENKDGLEKQLKELRAAGVDGVMGDVWWGIVESKGPKQYDWNAYRSLFELVQLCGLKIQAIMSFHQCGGNVGDAVNIHLPQWVLDI GESDPDIFYTNRTGNRNKEYLTIGADNQPLFGGRTAVEIYSDYMQSFRDNMSDFLDAGLVIDIEVGLGPAGELRYPSYPSSQGWVFPGIGEFQCYDKYLK AEFLEAATSAGHPEWELPDNAGEYNDTPESTEFFGSNGTYLTEKGKFFLTWYSNKLLGHGDQILEEANKIFLGYKVKLAAKVSGIHWWYKSDSHAAELTA GYYNLQDRDGYRPIARMLSRHYAILNFTCLEMRDSEQSASAKSGPQELVQQVLSGGWRENIEVAGENALARYDRSGYNQILLNARPNGVNKDGPPKLKMS GVTYLRLSDDLLEAKNFSIF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 509 Download |
| MLANYVPVYV MLPLEVVTVD NVLENKDGLE KQLKELRAAG VDGVMGDVWW GIVESKGPKQ 60 YDWNAYRSLF ELVQLCGLKI QAIMSFHQCG GNVGDAVNIH LPQWVLDIGE SDPDIFYTNR 120 TGNRNKEYLT IGADNQPLFG GRTAVEIYSD YMQSFRDNMS DFLDAGLVID IEVGLGPAGE 180 LRYPSYPSSQ GWVFPGIGEF QCYDKYLKAE FLEAATSAGH PEWELPDNAG EYNDTPESTE 240 FFGSNGTYLT EKGKFFLTWY SNKLLGHGDQ ILEEANKIFL GYKVKLAAKV SGIHWWYKSD 300 SHAAELTAGY YNLQDRDGYR PIARMLSRHY AILNFTCLEM RDSEQSASAK SGPQELVQQV 360 LSGGWRENIE VAGENALARY DRSGYNQILL NARPNGVNKD GPPKLKMSGV TYLRLSDDLL 420 EAKNFSIFKT FVKKMHADQD YCPDPNKYNS PIVPLEKSKP KIPIEDILEA TKPMVPFPFN 480 KETDMSVGGG GLSDLLGSLI NRITSIFK* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 5.0e-123 | 5 | 438 | 437 | + beta-amylase | ||
| PLN00197 | PLN00197 | 3.0e-154 | 6 | 440 | 439 | + beta-amylase; Provisional | ||
| PLN02905 | PLN02905 | 2.0e-155 | 5 | 438 | 438 | + beta-amylase | ||
| PLN02803 | PLN02803 | 2.0e-172 | 6 | 435 | 433 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 508 | 508 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK30294.1 | 0 | 1 | 508 | 12 | 514 | AF353207_1 beta-amylase [Castanea crenata] |
| EMBL | CAN70833.1 | 0 | 1 | 508 | 13 | 520 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI28977.1 | 0 | 1 | 508 | 1 | 508 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002281003.1 | 0 | 1 | 508 | 13 | 520 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327920.1 | 0 | 1 | 507 | 11 | 517 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 1 | 489 | 7 | 495 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1q6c_A | 0 | 1 | 489 | 7 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 1 | 489 | 7 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1v3i_A | 0 | 1 | 489 | 7 | 495 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1v3h_A | 0 | 1 | 489 | 7 | 495 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 487 | 2 | 487 | 0 |
| HO803971 | 396 | 84 | 479 | 0 |
| HO782669 | 385 | 101 | 485 | 0 |
| GT625519 | 284 | 83 | 366 | 0 |
| CV290805 | 309 | 127 | 435 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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