| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01030716001 |
| Family | CBM43 |
| Protein Properties | Length: 495 Molecular Weight: 53189.7 Isoelectric Point: 5.5138 |
| Chromosome | Chromosome/Scaffold: 14 Start: 14461122 End: 14465888 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 360 | 441 | 4e-31 |
| CTAKDGADEKMLQAALDWACGPGKVDCSPLLQGKDCYEPDNVAAHATFAFDTYYHKMGKAPGTCDFNGVAAITTTDPSHGSC | |||
| GH17 | 22 | 341 | 0 |
| IGVNIGTDLSDMPHPTQVVALLKAQQIRHVRLFNAEPAMLTALANTGIRVTVAIPNEQVLGVGQSNSTAANWVSRNIVAHYPATNITTIAIGSEVLTTLP NAAPVLVNALKFIHSALLASNLDRQIKVSTPLSSSIILDSFPPSQAFFNRSWNPVMVPMLNFLQSTGSFLMLNIYPYYDYMQSNGVIPLDYALFKPLLPN KEAVDANTLLHYSNVFDAMVDAAYFAMAYLNFTNIPVMVTESGWPSKGGSNEPDATVDNANTYNSNLIRHVLNKTGTPKHPGIAVSTYIYELYNEDMKSG PISEKNWGLFDANGTPIYIL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 495 Download |
| MALLLLFVLL ISLVAADDDA FIGVNIGTDL SDMPHPTQVV ALLKAQQIRH VRLFNAEPAM 60 LTALANTGIR VTVAIPNEQV LGVGQSNSTA ANWVSRNIVA HYPATNITTI AIGSEVLTTL 120 PNAAPVLVNA LKFIHSALLA SNLDRQIKVS TPLSSSIILD SFPPSQAFFN RSWNPVMVPM 180 LNFLQSTGSF LMLNIYPYYD YMQSNGVIPL DYALFKPLLP NKEAVDANTL LHYSNVFDAM 240 VDAAYFAMAY LNFTNIPVMV TESGWPSKGG SNEPDATVDN ANTYNSNLIR HVLNKTGTPK 300 HPGIAVSTYI YELYNEDMKS GPISEKNWGL FDANGTPIYI LHLTGSGLVL ANDTLNQTYC 360 TAKDGADEKM LQAALDWACG PGKVDCSPLL QGKDCYEPDN VAAHATFAFD TYYHKMGKAP 420 GTCDFNGVAA ITTTDPSHGS CRFLGSGGKN GSFVNGTAPS MNSTSTSSAA CYAFTSSISS 480 IMIIKVLIWS AFFL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-6 | 254 | 334 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 4.0e-19 | 358 | 429 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-39 | 358 | 443 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-90 | 22 | 339 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK85402.2 | 0 | 1 | 472 | 1 | 472 | beta-1,3-glucanase [Camellia sinensis] |
| EMBL | CBI33479.1 | 0 | 1 | 494 | 1 | 494 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265396.1 | 0 | 14 | 475 | 14 | 476 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301689.1 | 0 | 14 | 494 | 1 | 481 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531922.1 | 0 | 18 | 489 | 30 | 503 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 22 | 339 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 22 | 344 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 22 | 344 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 22 | 344 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 22 | 344 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
