| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01031495001 |
| Family | GH29 |
| Protein Properties | Length: 407 Molecular Weight: 46375.9 Isoelectric Point: 5.0524 |
| Chromosome | Chromosome/Scaffold: 6 Start: 17955504 End: 17959506 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH29 | 2 | 289 | 0 |
| AMFLHFGPNTFTDSEWGSGHAHPSVFFPTRFNASQWIQVAKDSGFSRVILTAKHHDGFCLWPSNYTDYSVRSSPWRGGTGDVVAELAEAAREAGIGLGLY LSPWDRHEECYGKTLEYNEYYMGQMTELLTRYGVIKHVFLDGAKGAGEKDMEYFFDCWFSLIHQLQPEAVIFSDAGPDTRWIGDEAGVAGSTCWSLLNRS AVTIGGTDYPYLRRGDPCGHDWVPAECDVSIRPGWFWHASESPKSARTLLDIYYSSVGRNCHFLLNVPPNTSGLISDEDIQVLQEFNE | |||
| Full Sequence |
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| Protein Sequence Length: 407 Download |
| MAMFLHFGPN TFTDSEWGSG HAHPSVFFPT RFNASQWIQV AKDSGFSRVI LTAKHHDGFC 60 LWPSNYTDYS VRSSPWRGGT GDVVAELAEA AREAGIGLGL YLSPWDRHEE CYGKTLEYNE 120 YYMGQMTELL TRYGVIKHVF LDGAKGAGEK DMEYFFDCWF SLIHQLQPEA VIFSDAGPDT 180 RWIGDEAGVA GSTCWSLLNR SAVTIGGTDY PYLRRGDPCG HDWVPAECDV SIRPGWFWHA 240 SESPKSARTL LDIYYSSVGR NCHFLLNVPP NTSGLISDED IQVLQEFNEL RNAIFSNNLA 300 ENGIYTYWAP EEDQSDWVLY FDFEEFVSFN VLQVQEPIHM GQRVSEFHLD ILDEKRDWKR 360 LISGTTVGYK RLLRFPKVET QGLRFVVDRS RADPLISYLA IHRVHQ* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00812 | Alpha_L_fucos | 1.0e-25 | 27 | 287 | 284 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| pfam01120 | Alpha_L_fucos | 7.0e-26 | 3 | 287 | 323 | + Alpha-L-fucosidase. | ||
| COG3669 | COG3669 | 3.0e-55 | 4 | 397 | 415 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI17157.1 | 0 | 1 | 406 | 1 | 406 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_180377.2 | 0 | 1 | 402 | 50 | 477 | ATFUC1 (alpha-L-fucosidase 1); alpha-L-fucosidase [Arabidopsis thaliana] |
| RefSeq | XP_002276131.1 | 0 | 1 | 402 | 62 | 484 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313533.1 | 0 | 1 | 402 | 26 | 452 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523703.1 | 0 | 1 | 402 | 75 | 502 | alpha-l-fucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ues_B | 0 | 1 | 404 | 31 | 478 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3ues_A | 0 | 1 | 404 | 31 | 478 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3mo4_B | 0 | 1 | 404 | 33 | 480 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3mo4_A | 0 | 1 | 404 | 33 | 480 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3uet_B | 0 | 1 | 404 | 31 | 478 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV240043 | 276 | 30 | 304 | 0 |
| EV240042 | 300 | 109 | 386 | 0 |
| DY270181 | 279 | 1 | 279 | 0 |
| EV240043 | 38 | 304 | 341 | 0.0000000002 |
| EV240043 | 11 | 337 | 347 | 0.0000000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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