| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01031644001 |
| Family | GT47 |
| Protein Properties | Length: 461 Molecular Weight: 53372.1 Isoelectric Point: 8.2485 |
| Chromosome | Chromosome/Scaffold: 5 Start: 19523280 End: 19525079 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 53 | 379 | 0 |
| GQYIYVHNLPSRFNDDLLEDCHSINQWYDICEYLSNSGLGPQLSNSGDVDDFPNKSWFATDQFLLEVIFRTRMKDYKCLTNDSAMASAVYVPFYAGLEIS RHLWGFNASPEWKRMWGKDHFLIVGRVTWDFRRMPNNESFWGSNFLRLPESENMTILGIESSHGADNDFGIPYPTYFHPSHDSEVFEWQNSMRRKRRQYL FSFAGADRPQDGDSIRGEMMNQCRASRDKCKLLDCAFDKKNNCKTINVMQMFQNSSFCLQPTGDSFTRRSTFDSILAGCIPVFFHPVSAYRQYLWHLPKE HTKYSVFIPMNYIKEGIASIEKVLLGI | |||
| Full Sequence |
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| Protein Sequence Length: 461 Download |
| MKFSLTNLLT ATPSLSYLIL LWRKQSLGSA SINSARAPKI FGQIHPIVDE CVGQYIYVHN 60 LPSRFNDDLL EDCHSINQWY DICEYLSNSG LGPQLSNSGD VDDFPNKSWF ATDQFLLEVI 120 FRTRMKDYKC LTNDSAMASA VYVPFYAGLE ISRHLWGFNA SPEWKRMWGK DHFLIVGRVT 180 WDFRRMPNNE SFWGSNFLRL PESENMTILG IESSHGADND FGIPYPTYFH PSHDSEVFEW 240 QNSMRRKRRQ YLFSFAGADR PQDGDSIRGE MMNQCRASRD KCKLLDCAFD KKNNCKTINV 300 MQMFQNSSFC LQPTGDSFTR RSTFDSILAG CIPVFFHPVS AYRQYLWHLP KEHTKYSVFI 360 PMNYIKEGIA SIEKVLLGIP EQRMLAMREE VISLIPKIIY ANPSSKLETI EDAFDISIRE 420 VLQRVKEMRR VGRGERTLSI PIMRSNQYLR HTSLIFKIYV * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-57 | 51 | 379 | 354 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI39429.1 | 0 | 1 | 460 | 1 | 460 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265362.1 | 0 | 34 | 437 | 55 | 474 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002280815.1 | 0 | 49 | 439 | 91 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002300146.1 | 0 | 46 | 433 | 103 | 493 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313430.1 | 0 | 45 | 429 | 136 | 532 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EY661612 | 258 | 171 | 428 | 0 |
| ES802449 | 292 | 157 | 448 | 0 |
| JG636298 | 265 | 124 | 372 | 0 |
| CX076275 | 261 | 128 | 372 | 0 |
| JK793974 | 238 | 128 | 349 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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