| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01031698001 |
| Family | CBM43 |
| Protein Properties | Length: 468 Molecular Weight: 51633.1 Isoelectric Point: 9.0839 |
| Chromosome | Chromosome/Scaffold: 5 Start: 20312697 End: 20315158 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 378 | 461 | 4.5e-29 |
| WCVVAKGANRTELGSALTYACGQGNGTCEPVQPGRKCYKPVSLVRHASFAFSSYWAQFRSTGGTCYFNGLAVQTMKDPSYGSCK | |||
| GH17 | 29 | 351 | 0 |
| VGVNYGLLGNNLPAASRSVQLIKGLKAGRVKLYDPNPEILEALSGTELQVSIMVPNQQISNISRSQKLSDQWVKTNVVPYYPETMIRYVLVGNEVLSLYD QKQGWPDLVPAMRRIKGSLRKFHIHKVKVGTPLAMDVLESSFPPSNGTFRSDISVSVVKPLLQFLNRTKSFFFLDVYPYFPWSSQPHNIKLDYALFEGGN LTYTDPGTGLTYTNLLDQMLDSVVFAMKRLGFPEIRLWIAETGWPNAGDIDQIGANIYNAATYNRNLIKRLNAKPPVGTPARPGSVLPTFIFSLYNENQK GGPGTERHWGLLYPNESSVYQID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 468 Download |
| MEVGVASGAG IFIFSILFFL SSAEISPKVG VNYGLLGNNL PAASRSVQLI KGLKAGRVKL 60 YDPNPEILEA LSGTELQVSI MVPNQQISNI SRSQKLSDQW VKTNVVPYYP ETMIRYVLVG 120 NEVLSLYDQK QGWPDLVPAM RRIKGSLRKF HIHKVKVGTP LAMDVLESSF PPSNGTFRSD 180 ISVSVVKPLL QFLNRTKSFF FLDVYPYFPW SSQPHNIKLD YALFEGGNLT YTDPGTGLTY 240 TNLLDQMLDS VVFAMKRLGF PEIRLWIAET GWPNAGDIDQ IGANIYNAAT YNRNLIKRLN 300 AKPPVGTPAR PGSVLPTFIF SLYNENQKGG PGTERHWGLL YPNESSVYQI DLTGETPESE 360 YPPLPAPENN EPYKGKIWCV VAKGANRTEL GSALTYACGQ GNGTCEPVQP GRKCYKPVSL 420 VRHASFAFSS YWAQFRSTGG TCYFNGLAVQ TMKDPSYGSC KFPSVTL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 265 | 343 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-17 | 378 | 449 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-34 | 378 | 462 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-114 | 29 | 351 | 324 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65039.1 | 0 | 20 | 467 | 16 | 460 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 1 | 467 | 1 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 20 | 467 | 16 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002298669.1 | 0 | 11 | 467 | 2 | 462 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 11 | 467 | 9 | 465 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 29 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 29 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 29 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 29 | 352 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
