| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01031959001 |
| Family | CBM43 |
| Protein Properties | Length: 491 Molecular Weight: 52362 Isoelectric Point: 5.0201 |
| Chromosome | Chromosome/Scaffold: 3 Start: 5719179 End: 5724128 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 404 | 485 | 8.2e-33 |
| WCVPKTGVSDAQLQANLDYACSQGIDCTPIQPGGACFEPNTVASHAAYAMNLLYQSSGKNSWNCDFTQTATLTSSNPSYNAC | |||
| GH17 | 59 | 377 | 0 |
| IGINYGQVANNLPPPEATAKLLKSTSIEKVRLYGADPGIIKALANTGIGIVIGAANGDIPALASDPNFAAQWVNSNVIAYYPASKIILITVGNEVMSSTD QNLMSQLLPAMQNVQNALNAASLGGKIKVSTVHSMAVLTQSDPPSSGAFNPATSDTMRGLLEFQRNTGSPFAINPYPFFAYQSDPRPETLAFCLFQPNAG RVDSGNNIKYTNMFDAQVDAVRSALNAMGFKEVEIVVAETGWPYSGDANGVGPSIENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDENLKPGPG SERAFGLFKPDLSMTYDVS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 491 Download |
| MPTLSHASIF FFFFSLLFPS LRFAIGFQWS GGTRVHEWVF GYIMGEKLEQ RGQDSQSFIG 60 INYGQVANNL PPPEATAKLL KSTSIEKVRL YGADPGIIKA LANTGIGIVI GAANGDIPAL 120 ASDPNFAAQW VNSNVIAYYP ASKIILITVG NEVMSSTDQN LMSQLLPAMQ NVQNALNAAS 180 LGGKIKVSTV HSMAVLTQSD PPSSGAFNPA TSDTMRGLLE FQRNTGSPFA INPYPFFAYQ 240 SDPRPETLAF CLFQPNAGRV DSGNNIKYTN MFDAQVDAVR SALNAMGFKE VEIVVAETGW 300 PYSGDANGVG PSIENAKAYN GNLIAHLRSM AGTPLMPGKS VDTYIFALYD ENLKPGPGSE 360 RAFGLFKPDL SMTYDVSLSK SSQTPSTPET PVNPSPNPTA SSVWCVPKTG VSDAQLQANL 420 DYACSQGIDC TPIQPGGACF EPNTVASHAA YAMNLLYQSS GKNSWNCDFT QTATLTSSNP 480 SYNACTFPGS * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-8 | 57 | 369 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-23 | 404 | 474 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-40 | 404 | 487 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 9.0e-102 | 59 | 377 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95331.1 | 0 | 55 | 489 | 20 | 453 | unknown [Populus trichocarpa] |
| EMBL | CAN61862.1 | 0 | 74 | 490 | 63 | 479 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI32582.1 | 0 | 1 | 490 | 1 | 490 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282736.1 | 0 | 55 | 489 | 24 | 462 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002284340.1 | 0 | 1 | 490 | 1 | 490 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 59 | 378 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 59 | 378 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 59 | 378 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_B | 0 | 59 | 379 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_A | 0 | 59 | 379 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
