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Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01032233001 |
Family | GT5 |
Protein Properties | Length: 609 Molecular Weight: 68832.9 Isoelectric Point: 6.6918 |
Chromosome | Chromosome/Scaffold: 11 Start: 13509504 End: 13529426 |
Description | starch synthase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 109 | 602 | 0 |
HIIHVTAEMAPIAKVGGLGDVVTGLARACLSRAHKVDIMLPFYECIQREQISELELITTYESYYDGNWVPTNAYRGVVSGIPVIFIQPSNYFFKGQYVYG GSYNELEAYLYFSRACLEWMQVTGTQPDIIHIHEWQTGSLPLLYWDMYHYLSLKKPRIVLTIHNMEHYGECRKEELSKCGLDGSIYATLDKAVDDRTIGH NPERLSLLKGGIVYSNVVITVSPTYLKETLCSGWLASTLILNRDKYYGVLNGIDTAMWNPATDVFLPSKFNARNTEGKKICKYYVQRGLGLILKGTSASK LINEMENKVPLIVCISRLVAQKGLHLITHAIKQVEERGGQIIVLGKASDGRVQTEFEGLANLHNQGPSIRILLTYSEELSHMLYAAADMVLVPSIYEPCG LAQMIGMRYGAIPIVRKTGGLADTVFDMDDQLHRETANGFVFEGIDEGSLNWALDRAFSFYREKPEEWNTTIQKVMEIDNSWNNTAGKYIDIYN |
Full Sequence |
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Protein Sequence Length: 609 Download |
MGTMSSVVEM KIDAFLSFNH LLKPKPSFTT TKLSSRFTFH DHNKKQTCKF KIRSQVGAEK 60 QTASVDSRVK DIVWPSPDDE IVFWNKEFPH WDVSQQAPAE IEKDSDLMHI IHVTAEMAPI 120 AKVGGLGDVV TGLARACLSR AHKVDIMLPF YECIQREQIS ELELITTYES YYDGNWVPTN 180 AYRGVVSGIP VIFIQPSNYF FKGQYVYGGS YNELEAYLYF SRACLEWMQV TGTQPDIIHI 240 HEWQTGSLPL LYWDMYHYLS LKKPRIVLTI HNMEHYGECR KEELSKCGLD GSIYATLDKA 300 VDDRTIGHNP ERLSLLKGGI VYSNVVITVS PTYLKETLCS GWLASTLILN RDKYYGVLNG 360 IDTAMWNPAT DVFLPSKFNA RNTEGKKICK YYVQRGLGLI LKGTSASKLI NEMENKVPLI 420 VCISRLVAQK GLHLITHAIK QVEERGGQII VLGKASDGRV QTEFEGLANL HNQGPSIRIL 480 LTYSEELSHM LYAAADMVLV PSIYEPCGLA QMIGMRYGAI PIVRKTGGLA DTVFDMDDQL 540 HRETANGFVF EGIDEGSLNW ALDRAFSFYR EKPEEWNTTI QKVMEIDNSW NNTAGKYIDI 600 YNSVRVRC* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02316 | PLN02316 | 1.0e-128 | 108 | 605 | 506 | + synthase/transferase | ||
PRK00654 | glgA | 1.0e-159 | 108 | 605 | 510 | + glycogen synthase; Provisional | ||
PLN02939 | PLN02939 | 6.0e-172 | 108 | 607 | 507 | + transferase, transferring glycosyl groups | ||
TIGR02095 | glgA | 4.0e-173 | 108 | 604 | 501 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 109 | 603 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13790.1 | 0 | 51 | 607 | 67 | 614 | starch synthase VI precursor [Solanum lycopersicum] |
GenBank | ACD13791.1 | 0 | 1 | 608 | 1 | 608 | starch synthase VI precursor [Vitis vinifera] |
GenBank | ACL36485.1 | 0 | 35 | 607 | 90 | 655 | starch synthase VI precursor [Picea glauca] |
RefSeq | XP_002268126.1 | 0 | 1 | 608 | 1 | 608 | PREDICTED: starch synthase VI [Vitis vinifera] |
RefSeq | XP_002331426.1 | 0 | 57 | 607 | 64 | 617 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d1j_A | 0 | 108 | 605 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 108 | 606 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 108 | 606 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4t_A | 0 | 108 | 606 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2qzs_A | 0 | 108 | 606 | 1 | 478 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EC985424 | 246 | 364 | 609 | 0 |
CB978382 | 256 | 288 | 543 | 0 |
DT020827 | 230 | 3 | 232 | 0 |
EX373959 | 301 | 182 | 482 | 0 |
GE474726 | 265 | 130 | 394 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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