| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01033325001 |
| Family | GT47 |
| Protein Properties | Length: 823 Molecular Weight: 93520 Isoelectric Point: 6.2435 |
| Chromosome | Chromosome/Scaffold: 8 Start: 21485403 End: 21494488 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 375 | 728 | 0 |
| KKRPLIYVYDLPPEFNSLLLEGRHFKFECVNRIYDDRNATYWTEQLYGAQMAIYESILASPHRTLDGEEADFFFVPVLDSCIIVRADDAPHLNMHAHGGL RSSLTLEFYKTAYDHIVEQYPFWNRSSGRDHIWFFSWDEGACYAPKEIWDSMMLVHWGNTNSKHNHSTTAYWADNWDSVSSDRRGNHPCFDPYKDLVLPA WKRPDVVSLSSKLWSRPREQRKTLFYFNGNLGPAYEGGRPETTYSMGIRQKVAEEFGSSPNKEGKLGKQHAEDVIVTPLRSGNYHESLASSVFCGVMPGD GWSGRFEDSILQGCIPVVIQDGIFLPFENMLNYESFAVRIREDEIPNLIKILRG | |||
| Full Sequence |
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| Protein Sequence Length: 823 Download |
| MLHHFPLIMV VNGHNSTNLS DKDKEANEMT FFLQKWKCSW SLLATVASVV ALISVAHLFL 60 FPLAPSLEYF SMGQGQKTCT PINASIRGVD HDGKNLQPSF DLDHRFPADS HKSVVYRGAP 120 WKAEIGRWFS GCDSIAAEVS IIEKIGGKDC KNDCSGQGIC NHELGQCRCF HGFSGEGCSE 180 RLHLDCNYPS SPEQPYGPWV VSICPASCDT TRAMCFCGEG TKYPHRPVAE ACGFQMNLPT 240 TPGDPKLVDW TKADLDNIFT TNDSKPGWCN VDPTEAYALK MQYKEECDCK YDCLLGRFCE 300 IPVLCTCVNQ CSGHGHCRGG FCQCHRGWYG TDCSIPSVLS SVREWPRWLR PAHVEVPDDM 360 HLSGSLVNLD AVVKKKRPLI YVYDLPPEFN SLLLEGRHFK FECVNRIYDD RNATYWTEQL 420 YGAQMAIYES ILASPHRTLD GEEADFFFVP VLDSCIIVRA DDAPHLNMHA HGGLRSSLTL 480 EFYKTAYDHI VEQYPFWNRS SGRDHIWFFS WDEGACYAPK EIWDSMMLVH WGNTNSKHNH 540 STTAYWADNW DSVSSDRRGN HPCFDPYKDL VLPAWKRPDV VSLSSKLWSR PREQRKTLFY 600 FNGNLGPAYE GGRPETTYSM GIRQKVAEEF GSSPNKEGKL GKQHAEDVIV TPLRSGNYHE 660 SLASSVFCGV MPGDGWSGRF EDSILQGCIP VVIQDGIFLP FENMLNYESF AVRIREDEIP 720 NLIKILRGMN ETEIEFKLEN VRKIWQRFLY RDSILLEAER QKTAFGNVED WAVQLLQLSE 780 DDVFATLIQV LHYKLHNDPW RQQLAHLKKD FGLAQECLIR TK* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07974 | EGF_2 | 0.0002 | 305 | 333 | 31 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
| pfam03016 | Exostosin | 3.0e-66 | 374 | 729 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN80640.1 | 0 | 29 | 812 | 1 | 809 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI29877.1 | 0 | 1 | 822 | 1 | 822 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_191322.3 | 0 | 31 | 821 | 2 | 792 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277596.1 | 0 | 29 | 822 | 1 | 794 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308967.1 | 0 | 33 | 821 | 4 | 792 | predicted protein [Populus trichocarpa] |
