| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01033384001 |
| Family | CBM43 |
| Protein Properties | Length: 480 Molecular Weight: 52341.4 Isoelectric Point: 4.718 |
| Chromosome | Chromosome/Scaffold: 8 Start: 21044818 End: 21048514 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 367 | 448 | 1.7e-24 |
| WCMFNPNAGDLSKLGDNINYACTFSDCTALGYGSSCNGLDAQGNASYAFNMYFQVKNQDDLSCYFQGLAKVTTQNISQGSCN | |||
| GH17 | 25 | 344 | 0 |
| LGVNWGTMASHKLPPKVVVQMLKDNGIQKVKLFDADSVTMSALAGSGIEVMVAIPNDQLAVMNDYDRAKAWVRRNVTRYNFNGGVTIKYVGVGNEPFLSS YNGSFLNITLPALQNIQNALNEAGVGDSIKATVPLNADVYNSPESNPVPSAGRFRTDISELMTQIVQFLNKNNAPFTVNIYPFLSLYGNDNFPFDYAFFD GVSNPIVDNGISYTNVFDANFDTLVSALKAVGLGDMTILVGEVGWPTDGDKNANSNNAYRFYNGLLPRLAGNIGTPLRPGYIEVYLFGLIDEDAKSIAPG NFERHWGIFKYDGQPKYALD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 480 Download |
| MVRRLWFFSW VLLVGLFGCA SVEGLGVNWG TMASHKLPPK VVVQMLKDNG IQKVKLFDAD 60 SVTMSALAGS GIEVMVAIPN DQLAVMNDYD RAKAWVRRNV TRYNFNGGVT IKYVGVGNEP 120 FLSSYNGSFL NITLPALQNI QNALNEAGVG DSIKATVPLN ADVYNSPESN PVPSAGRFRT 180 DISELMTQIV QFLNKNNAPF TVNIYPFLSL YGNDNFPFDY AFFDGVSNPI VDNGISYTNV 240 FDANFDTLVS ALKAVGLGDM TILVGEVGWP TDGDKNANSN NAYRFYNGLL PRLAGNIGTP 300 LRPGYIEVYL FGLIDEDAKS IAPGNFERHW GIFKYDGQPK YALDLSGQGQ NKLLVAAKDV 360 TYLPQKWCMF NPNAGDLSKL GDNINYACTF SDCTALGYGS SCNGLDAQGN ASYAFNMYFQ 420 VKNQDDLSCY FQGLAKVTTQ NISQGSCNFI VQIESSSSSL WQPSLVASAF VMVLAFLVL* 480 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 6.0e-5 | 252 | 336 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-16 | 366 | 435 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-31 | 366 | 449 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-76 | 25 | 344 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ90287.1 | 0 | 22 | 479 | 25 | 480 | beta-1,3-glucanase, acidic [Coffea arabica] |
| GenBank | ABN09816.1 | 0 | 2 | 458 | 1 | 459 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
| RefSeq | NP_179534.1 | 0 | 7 | 459 | 3 | 454 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277003.1 | 0 | 1 | 459 | 1 | 459 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002525445.1 | 0 | 20 | 467 | 18 | 467 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 25 | 346 | 2 | 316 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 3f55_C | 0 | 25 | 346 | 2 | 316 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 3f55_B | 0 | 25 | 346 | 2 | 316 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 3f55_A | 0 | 25 | 346 | 2 | 316 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 3em5_D | 0 | 25 | 346 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
