| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01033880001 |
| Family | AA3 |
| Protein Properties | Length: 1360 Molecular Weight: 153529 Isoelectric Point: 8.8706 |
| Chromosome | Chromosome/Scaffold: 8 Start: 17050520 End: 17062140 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 627 | 906 | 1.5e-21 |
| KLGGVLFMSRYRSTSVHLLGGCNASSHPSDGVCNPNGQVFDPKFPPSVHPGLYVCDASLIPCSVGVNPCLTIATAAEHVSNHLVQDVLKYRTREGIEFMG KTVEQKPNLIPHRRLDSSMKPTVVIKETMRGYVGGMPCSAYLKMKMNCWNQNGFDERYQVMDESHPLLRGKVGGYVVFRSVEKDKLHVIDGDVDLCGVDY RTPYTQYMCYRLLLSASSGSRYILEGRKIMNPYLSALYAWTESTTMHVTFKKVAKNSSTDQMMILRGELCISTTELLKSL | |||
| Full Sequence |
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| Protein Sequence Length: 1360 Download |
| MCGVDYRTPY TQYMCYRLLL SGSSGSRYIL EGRKIMNPYL FALYAWTESM TMHVTFKKVA 60 KNSSTDQMMI LRGELCISTT ELLKSLISLE GNRKGKFIRL FLQSLFRTYI TQVPRGNHGD 120 FPMSHLYRRP YPDSTLHDIK TGDGFIISCR QWKCGQNPWV PEEERKRNPV LLVNGHSTES 180 YYLPTEPNDL IRTLLEEGHE TWLLQTRLHP LNPSNNFTIE DIGRFDIPAA IGKILELHGL 240 SAKIHLVAHC VGGLAIHIAL MGGHVTANHL ASLSCTNSSM FFKITVSSRV KMCLPLIPIS 300 MLILGKNKIL PIFKTMKATP RQQLLKSIAQ FIPRCERCTC DECEVFSGIF GNTFWHENVS 360 PSMHHWLNKV NLPRLPMAAF PHLRKICNNG FIVDSNGKNS YLTHPERMAL PTLYISGGKS 420 LLVTPQTSFL ANKYMMLHQP GFRHERVVVE GFGHSDLLIG EESYKKVFPH ILSHLRLAED 480 GRRNGGVSAE GLKCSKEALD WGDDPSYEAG CEGFWTWVSP SVNVWFANHS VFCQGAVLPK 540 AFPHLLFKGI TTYGWPTRYW FLHGVIEKIK HMLGLKSSQA MVLNAMGYDE SDGKITFEKE 600 TNKICFSPPH DHLLPRKIKA FQKLTRKLGG VLFMSRYRST SVHLLGGCNA SSHPSDGVCN 660 PNGQVFDPKF PPSVHPGLYV CDASLIPCSV GVNPCLTIAT AAEHVSNHLV QDVLKYRTRE 720 GIEFMGKTVE QKPNLIPHRR LDSSMKPTVV IKETMRGYVG GMPCSAYLKM KMNCWNQNGF 780 DERYQVMDES HPLLRGKVGG YVVFRSVEKD KLHVIDGDVD LCGVDYRTPY TQYMCYRLLL 840 SASSGSRYIL EGRKIMNPYL SALYAWTEST TMHVTFKKVA KNSSTDQMMI LRGELCISTT 900 ELLKSLVSLE GNRKGKFICL LLQSLFRTYI TQVPRGNLED FPLFHLYSRP YPDSTLHDLK 960 TGDGVIVSCR QWKCSQNPWV LEEERKLNPV LLVNGYSIES YYLPTEPNDL IRSLLEEGHE 1020 TWLLQTRLHP LHPSNNFTIE DIGRFDIPAA IGKILELHGP SVKIHLVAHC VGGLAIHIAL 1080 MGGHVSANHI ASLSCTNSSM FFKITVSSRV KMCLPLIPMS MLILGKNKTL PLFETLKATP 1140 RQQLLKSIAR FMPRYERCPC DECEVFSGIF GNGFWHDNVS PTVHHWLNKV SLPRLPMAAF 1200 PHLRKICNNG FIVDSNGKNS YLIHPERMAL PTLYISGGRS LLVTPQTSFL ANKYMKLHQP 1260 GFRHERVVVE GFGHSDLLIG EESYKKVFPH ILSHMRLAED GRRNGGVGGE SLKYSKETLD 1320 WDDDQYEAAG YGGFGTWVSP SVNVWLFLAL IVMLVSFYL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3243 | PhaC | 0.005 | 989 | 1094 | 108 | + Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | ||
| COG3243 | PhaC | 0.004 | 169 | 261 | 99 | + Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | ||
| COG2303 | BetA | 1.0e-10 | 599 | 712 | 114 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 2.0e-13 | 633 | 704 | 72 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62038.1 | 0 | 1 | 510 | 602 | 1093 | hypothetical protein [Vitis vinifera] |
| EMBL | CAN62038.1 | 0 | 534 | 1329 | 315 | 1093 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 1 | 1329 | 1 | 1329 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 821 | 1346 | 1 | 526 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002530344.1 | 0 | 534 | 1336 | 350 | 1149 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.0007 | 619 | 710 | 415 | 502 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 1coy_A | 0.0007 | 619 | 710 | 415 | 502 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 3cnj_A | 0.007 | 593 | 713 | 379 | 499 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 2gew_A | 0.008 | 593 | 713 | 381 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4w_A | 0.008 | 593 | 713 | 381 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| Transmembrane Domains | ||||
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| Start | End | |||
| 1336 | 1358 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DV113989 | 240 | 177 | 416 | 0 |
| DV113989 | 240 | 997 | 1236 | 0 |
| DV112370 | 237 | 179 | 415 | 0 |
| DV112370 | 238 | 998 | 1235 | 0 |
| CF418642 | 220 | 1043 | 1262 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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