| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01034309001 |
| Family | CBM57 |
| Protein Properties | Length: 263 Molecular Weight: 29368.1 Isoelectric Point: 8.7906 |
| Chromosome | Chromosome/Scaffold: 9 Start: 14658947 End: 14663881 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 59 | 239 | 8.4e-28 |
| HINCGGEKSTVGNVVYEGDQYEGGAAKFHPMIDYWGFSSTGHFWDHNRTINDYIAQNVSVLGMNHSGLYTRARLSPLSFTYYGRCLADGNYTVKIHFAEI IIRGNKSFHSLGRQIFNVYIQGKLESEDFDIVQAAQGVEKVVVKEFKAVVKNKTLEVRFHWAGKGTTAIPSRGTYGPLISA | |||
| Full Sequence |
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| Protein Sequence Length: 263 Download |
| MAILLHQDTG NRLNGNIPDG IKGRQSRTNL FRSFSEEGNL ELGGCLENYP CQKDRYSLHI 60 NCGGEKSTVG NVVYEGDQYE GGAAKFHPMI DYWGFSSTGH FWDHNRTIND YIAQNVSVLG 120 MNHSGLYTRA RLSPLSFTYY GRCLADGNYT VKIHFAEIII RGNKSFHSLG RQIFNVYIQG 180 KLESEDFDIV QAAQGVEKVV VKEFKAVVKN KTLEVRFHWA GKGTTAIPSR GTYGPLISAI 240 SVESGEFRPY SFLVKYRSLS LS* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03150 | PLN03150 | 5.0e-7 | 55 | 242 | 188 | + hypothetical protein; Provisional | ||
| pfam11721 | Malectin | 1.0e-46 | 56 | 240 | 188 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN69506.1 | 0 | 75 | 260 | 5 | 195 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI30746.1 | 0 | 9 | 251 | 339 | 602 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI38985.1 | 0 | 1 | 262 | 1 | 262 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264180.1 | 0 | 9 | 251 | 354 | 605 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264642.1 | 0 | 10 | 251 | 335 | 593 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT005617 | 189 | 53 | 241 | 0 |
| FR622291 | 215 | 29 | 242 | 0 |
| DY669061 | 221 | 29 | 248 | 0 |
| FN754390 | 198 | 54 | 249 | 0 |
| EL420730 | 226 | 27 | 249 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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