| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01034320001 |
| Family | CBM57 |
| Protein Properties | Length: 143 Molecular Weight: 16000.3 Isoelectric Point: 9.782 |
| Chromosome | Chromosome/Scaffold: 9 Start: 14817216 End: 14817932 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 3 | 105 | 6.3e-22 |
| HSELYTRARLSPLTFTYYGRCLADGNYTVKIHFAEIIIRGNKSFHSLGRQIFNVYIQGKLESEDFDVVQAAQGVEKVVVKEFKAVVKNKTLETHFHWAGK GTT | |||
| Full Sequence |
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| Protein Sequence Length: 143 Download |
| MNHSELYTRA RLSPLTFTYY GRCLADGNYT VKIHFAEIII RGNKSFHSLG RQIFNVYIQG 60 KLESEDFDVV QAAQGVEKVV VKEFKAVVKN KTLETHFHWA GKGTTAIPSR GTCGPLISAI 120 SVESGEFRPY SFLVKYRSFS LS* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12819 | Malectin_like | 0.007 | 13 | 69 | 57 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0.0001 | 28 | 122 | 95 | + hypothetical protein; Provisional | ||
| pfam11721 | Malectin | 2.0e-36 | 4 | 120 | 119 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN69506.1 | 0 | 1 | 136 | 51 | 191 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI25799.1 | 0 | 1 | 142 | 1 | 142 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33018.1 | 0 | 1 | 142 | 1 | 142 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI38985.1 | 0 | 1 | 142 | 121 | 262 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI38992.1 | 0 | 1 | 142 | 1 | 142 | unnamed protein product [Vitis vinifera] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT005617 | 121 | 1 | 121 | 0 |
| FN706866 | 129 | 1 | 129 | 0 |
| FN707604 | 129 | 1 | 129 | 0 |
| FN707354 | 129 | 1 | 129 | 0 |
| FN707163 | 129 | 1 | 129 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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