| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01035033001 |
| Family | GH3 |
| Protein Properties | Length: 739 Molecular Weight: 80092.2 Isoelectric Point: 7.8421 |
| Chromosome | Chromosome/Scaffold: 5 Start: 1049338 End: 1054356 |
| Description | beta-xylosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 74 | 320 | 0 |
| DVPRLGIKGYEWWSEALHGVSNVGPGTKFGGSFPGATSFPQVITTAASFNASLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGE DPAVAAKYAAAYVRGLQGNARDRLKVAACCKHYTAYDLDHWGGIDRFHFNARVSKQDLEDTYDVPFKACVVEGNVASVMCSYNQVNGKPTCADPHLLRDT IRGEWKLNGYIVSDCDSVGVFYDEQHYTATPEEAAAVAIKAGLDLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 739 Download |
| MSYTQFSVLL LLLAALLCSF AEAREPFACD PRNGVTRNLP FCRVSLPIQE RARDLVGRLT 60 LQEKIRLLVN NAIDVPRLGI KGYEWWSEAL HGVSNVGPGT KFGGSFPGAT SFPQVITTAA 120 SFNASLWEEI GRVVSDEARA MYNGGMAGLT YWSPNVNIFR DPRWGRGQET PGEDPAVAAK 180 YAAAYVRGLQ GNARDRLKVA ACCKHYTAYD LDHWGGIDRF HFNARVSKQD LEDTYDVPFK 240 ACVVEGNVAS VMCSYNQVNG KPTCADPHLL RDTIRGEWKL NGYIVSDCDS VGVFYDEQHY 300 TATPEEAAAV AIKAGLDLDC GPFLAIHTEA AIRGGKLTEA DVNGALMNTI SVQMRLGMFD 360 GEPSAQPYGN LGPRDVCTPA HQQLALEAAR QGIVLVQNRG PALPLSTSRH RTIAVIGPNS 420 DVTETMIGNY AGVACGYTTP LQGIGRYART IHQAGCSGVA CRDDQQFGAA VAAARQADAT 480 VLVMGLDQSI EAEFRDRVDI LLPGRQQELV SKVAVASRGP TVLVLMSGGP IDVSFAKNDP 540 RIAAIIWVGY PGQAGGTAIA DVLFGRTNPG GKLPVTWYPQ SYLRKAPMTN MAMRAIPSRG 600 YPGRTYRFYN GPVVFPFGHG LSYSTFAHSL AQAPTTPLGF HIDVKNTGTM DGSHTLLLFS 660 TPPPGTWSPN KRLLAFEKVH VGAGSQERVR FDVHVCKHLS VVDHFGIHRI PMGEHHFHIG 720 DLKHSISLQA TLEEIKSK* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 5.0e-53 | 70 | 457 | 394 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 2.0e-55 | 393 | 625 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 8.0e-58 | 55 | 343 | 297 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 2.0e-74 | 110 | 693 | 638 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 21 | 730 | 762 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS17751.2 | 0 | 9 | 737 | 14 | 772 | beta xylosidase [Fragaria x ananassa] |
| EMBL | CBI22910.1 | 0 | 1 | 738 | 1 | 738 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002276351.1 | 0 | 1 | 738 | 1 | 770 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316021.1 | 0 | 20 | 737 | 21 | 768 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519194.1 | 0 | 20 | 736 | 35 | 781 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 110 | 693 | 91 | 696 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
| PDB | 3u48_A | 0 | 110 | 693 | 91 | 696 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
| PDB | 3u4a_B | 0 | 110 | 693 | 91 | 696 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
| PDB | 3u4a_A | 0 | 110 | 693 | 91 | 696 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
| PDB | 2x41_A | 8.40779e-45 | 50 | 732 | 2 | 711 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
