| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01035106001 |
| Family | GT4 |
| Protein Properties | Length: 809 Molecular Weight: 92555.8 Isoelectric Point: 6.3293 |
| Chromosome | Chromosome/Scaffold: 5 Start: 1507786 End: 1515522 |
| Description | sucrose synthase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 566 | 733 | 0 |
| SDRSKPIIFSMARLDRVKNITGLVECFGKSSKLRELVNLVVVAGYIDVTKSRDREETKEIEKMHDLIKKYNLHGQFRWIPAQMNRARNGELYRYIADTKG AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEDGLSGFHIDPYHPDQVALRLADFFERCQKD | |||
| Full Sequence |
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| Protein Sequence Length: 809 Download |
| MPHRYDGQSM RERFQETLSA HRNELVSLFT GYVAQGKGIL QPHHMIDELD KVVGKDEGMQ 60 KLRDSPFSKV LKSAQEAIVL PPFVAIAIRP RPGVWEYIRV NVYELNVDQL SVSEYLQFKE 120 ELVDGQIKGN YVLELDFEPF NATFPRPTRS SSIGNGVQFL NRHLSSIMFR NKESLEPLLD 180 FLRAHKHDGH VMMLNDRIQN ISRLQSALAR AEEYLSKLPP LTPYSEFEFE LQGMGFEKGW 240 GDTAQRVSEM VHLLLEILQA PDPSTLETFL GRIPMVFNVV IVSPHGYFGQ ANVLGLPDTG 300 GQIVYILDQV RALENEMLLR IQKQGLDVIP KILIVTRLIP DAKGTTCNQR LERISGTEHT 360 HILRVPFRTE NGILRKWISR FDVWPYLETF AEDASNEIAA ELQGVPDLII GNYSDGNLVA 420 SLLSYKMGIT QCNIAHALEK TKYPESDIYW RKFEDKYHFS SQFTADLIAM NNADFIITST 480 YQEIAGSKNH VGQYESHTAF TLPGLYRVVH GIDVFDPKFN IVSPGADMSI YFSYSEKERR 540 LTALHDSIES LLYDSEQNDD HIGMLSDRSK PIIFSMARLD RVKNITGLVE CFGKSSKLRE 600 LVNLVVVAGY IDVTKSRDRE ETKEIEKMHD LIKKYNLHGQ FRWIPAQMNR ARNGELYRYI 660 ADTKGAFVQP AFYEAFGLTV VEAMTCGLPT FATCHGGPAE IIEDGLSGFH IDPYHPDQVA 720 LRLADFFERC QKDPSYWDEI SNGGLKRIYE RYTWKIYTER LLTLAGVYGF WKHVSKLERR 780 ETRRYLEMFY ILKLKDLATS IPLAVDEH* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 1.0e-66 | 279 | 765 | 495 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 2.0e-136 | 278 | 763 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 1 | 808 | 808 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 22 | 804 | 784 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 9 | 553 | 545 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA88904.1 | 0 | 9 | 804 | 11 | 806 | sucrose synthase [Citrus unshiu] |
| DDBJ | BAA88981.1 | 0 | 9 | 804 | 11 | 806 | sucrose synthase [Citrus unshiu] |
| RefSeq | NP_199730.1 | 0 | 8 | 808 | 7 | 807 | SUS2 (SUCROSE SYNTHASE 2); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002271530.1 | 0 | 1 | 808 | 1 | 808 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002271896.1 | 0 | 9 | 808 | 11 | 810 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 8 | 807 | 12 | 808 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3s29_G | 0 | 8 | 807 | 12 | 808 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3s29_F | 0 | 8 | 807 | 12 | 808 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3s29_E | 0 | 8 | 807 | 12 | 808 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3s29_D | 0 | 8 | 807 | 12 | 808 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 800 | 8 | 806 | 0 |
| BU103683 | 799 | 8 | 806 | 0 |
| CX109054 | 607 | 101 | 707 | 0 |
| HO778590 | 270 | 271 | 540 | 0 |
| HO778590 | 276 | 532 | 807 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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