| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01035865001 |
| Family | CBM57 |
| Protein Properties | Length: 650 Molecular Weight: 70748.7 Isoelectric Point: 6.8401 |
| Chromosome | Chromosome/Scaffold: 4 Start: 5017843 End: 5022700 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 404 | 572 | 5.8e-30 |
| SIKCGGTEQRSASGVKFDDDSEILGAASLYTSPDYQWAVSNTGSFISNPNGPQYIAKTDSQIRGTLESELYKTARVSPSSLRYYGLGLKNGKYRVELHFA EIAMEDSVSWKGLGRRLFDVYIQGERVLEGFNIQREAGGSKRALVKTLEANVTNTIMEIHFLWAGRGTC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 650 Download |
| MGVLTVSFFV LCIIELVAAQ TTTDRDEVAA LNKLIDYWNL RSLNSSIDPC TQNATWASKD 60 ANPRVACDCT SNTCHITHLK IYALDISGEI PPELFVLKKL VDLNLGQNVL SGPIPAEIGQ 120 LSNLQYLSLG INNLTGRVPS ELGNLTKLVS LSFGSNNFFG PLPKELGNLT SLQQLYIDSS 180 GVSGPIPQEF AGLKSLQILW ASDNLFTGKL PEFIGTLIEL RDLRVEGTLL EGPIPSSFGA 240 LTKLEDLRIG DLRGQDSSLD FLGSQTSLSI LSLRNCRVSG RIPDQLSTFT KLKYLDLSFN 300 KLTGEILKSF QDFVSLEYLY LGNNNLNGEL PANIISQELI ALDVSFNPLS GNLPLNIAKV 360 GLSMNVLGTS INANSLQDRK ASGMLHCLQG NMKCTNKIPS SSFSIKCGGT EQRSASGVKF 420 DDDSEILGAA SLYTSPDYQW AVSNTGSFIS NPNGPQYIAK TDSQIRGTLE SELYKTARVS 480 PSSLRYYGLG LKNGKYRVEL HFAEIAMEDS VSWKGLGRRL FDVYIQGERV LEGFNIQREA 540 GGSKRALVKT LEANVTNTIM EIHFLWAGRG TCCIPFQSTY GPLVSAIHAY QVSDETSSSS 600 ESNKKRIGKV VGIVVGCAGG VVIISSIFYL WWKKEASGHT RVQTESPRK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 8.0e-34 | 72 | 374 | 315 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 4.0e-34 | 79 | 407 | 354 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 6.0e-35 | 81 | 379 | 307 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-36 | 86 | 353 | 269 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 1.0e-52 | 402 | 587 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21051.1 | 0 | 1 | 649 | 1 | 649 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282711.1 | 0 | 1 | 649 | 157 | 791 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309634.1 | 0 | 19 | 588 | 19 | 462 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002324865.1 | 0 | 1 | 648 | 1 | 593 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515504.1 | 0 | 1 | 649 | 245 | 894 | ATP binding protein, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 3e-24 | 86 | 354 | 403 | 694 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 3rj0_A | 2e-23 | 71 | 331 | 412 | 718 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 3rj0_A | 2e-19 | 66 | 360 | 289 | 652 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 3rj0_A | 8e-19 | 76 | 319 | 441 | 732 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 3rj0_A | 3e-18 | 71 | 354 | 171 | 432 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
