| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01035881001 |
| Family | GT47 |
| Protein Properties | Length: 403 Molecular Weight: 46887.2 Isoelectric Point: 9.2503 |
| Chromosome | Chromosome/Scaffold: 4 Start: 5211280 End: 5215609 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 67 | 353 | 0 |
| EKRFRVWTYQEGEKPLFHSGPMNLIYGIEGQFMDELESKNCPFSARHPDEAMLFYIPISVVNIIRYVYQPYTNSASYSRVRLQGLVADYIDVISRKYPFW NRSSGADHFMVSCHDWAPEISAANPKFFRHFIRVLCNANTSEGFKPVRDVSLPEILVPYRMLGPPYLGQPPTNRSILAFFAGGAHGKVRSILFHYWKEKD EDIQVHEYLPTTLNYTELMGRSKFCLCPSGFEVASPRVVESIYAGCVPVIISDNYSLPFSDVLDWSQFSVHIPIARIPETKTILQAI | |||
| Full Sequence |
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| Protein Sequence Length: 403 Download |
| MVFLCCFQLE KKSYFEKREE SLAKARVAIR KAGRSRDYTL YKNESFFPRG PVYRNPYAFY 60 QSHIEMEKRF RVWTYQEGEK PLFHSGPMNL IYGIEGQFMD ELESKNCPFS ARHPDEAMLF 120 YIPISVVNII RYVYQPYTNS ASYSRVRLQG LVADYIDVIS RKYPFWNRSS GADHFMVSCH 180 DWAPEISAAN PKFFRHFIRV LCNANTSEGF KPVRDVSLPE ILVPYRMLGP PYLGQPPTNR 240 SILAFFAGGA HGKVRSILFH YWKEKDEDIQ VHEYLPTTLN YTELMGRSKF CLCPSGFEVA 300 SPRVVESIYA GCVPVIISDN YSLPFSDVLD WSQFSVHIPI ARIPETKTIL QAIPIQEYLT 360 KQKTVMQVQR HFTLNRPAKR FDVLHMVLHS IWLRRINIQL PL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 6.0e-64 | 66 | 353 | 306 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21065.1 | 0 | 1 | 402 | 1 | 402 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | Q9LFP3 | 0 | 19 | 402 | 93 | 478 | GLYT4_ARATH RecName: Full=Probable glycosyltransferase At5g11130 |
| RefSeq | XP_002263848.1 | 0 | 9 | 401 | 1 | 395 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285239.1 | 0 | 66 | 402 | 1 | 337 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002515488.1 | 0 | 8 | 400 | 79 | 468 | catalytic, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EC939466 | 295 | 9 | 301 | 0 |
| CO983212 | 231 | 171 | 400 | 0 |
| CV880634 | 206 | 154 | 359 | 0 |
| GE475605 | 300 | 104 | 400 | 0 |
| FD507587 | 231 | 109 | 339 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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