| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01036381001 |
| Family | GH116 |
| Protein Properties | Length: 954 Molecular Weight: 106785 Isoelectric Point: 6.1986 |
| Chromosome | Chromosome/Scaffold: 18 Start: 4445368 End: 4460308 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 526 | 887 | 0 |
| GQFLYLEGIEYHMWNTYDVHFYSSFAIIMLFPQLELSIQRDFAAAVMVHDPSRMKIMSDGKWVPRKVLGAVPHDIGISDPWFELNAYNLYDTDRWKDLNS KFVLQVYRDMVATGDKNFARAVWPAVYIAIAFLDQFDKDGDGMIENDGFPDQTYDAWSVTGVSAYCGGLWVAALQAASAMAREVGDSMTADYFWFKFQKA KAVYDKLWNGSYFNYDNSGGSSSSSIQADQLAGQWYARACGLQPIVDDEKARSALEKVYNFNVLKVKEGKCGAVNGMLPDGRVDMSAMQSREIWAGVTYS VAANMIHEGMVETAFNTASGIYDAAWSQEGLGYSFQTPEAWNTDEEYRSLCYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 954 Download |
| MENGHKEDGD MEHPVKSSAH KVNPGKPASL TWQRKLNTKA NTLTRFNLKL REIKHLAPLG 60 VRLWHHVNAE AAKGRISIID PFSKRLVTSY HGVPLGGIGG GSIGRSYRGE FQRYQLFPRI 120 CEDSPVLANQ FSVFVSRPNG KKSSTVLCPR NPEVLKGSAS SGIGSWDWNL DGESCTYHAL 180 YPRAWTVYEG EPDPEISIIS SQISPFIPHN YKESSFPVSV FKFTLSNSGK TSADITLLFT 240 WANSVGGTSE FSGHHYNSKM KTKDGVHGVL LHHKTANGHP PVTFAIAAEE TGDVHISECP 300 CFLISGNSLG VTAKEMWQEI KQHGSFDHLD FDGSSMRSEP GSSIGAAVAA SLTLPPDTVR 360 TVTFSLAWAC PEVRFTSGKT YHRRYTRFYG THVDAAEEIA HDAILEHANW VSEIEAWQGP 420 ILEDRRLPEW YRITLFNELY FLNAGGTIWT DGLPPMQSLA TIEQIKFSLD RSISDPKNTT 480 DIVHQNDSTV EILGRMTSML EQIHNPTTSN SAFGTYLLQS GEENVGQFLY LEGIEYHMWN 540 TYDVHFYSSF AIIMLFPQLE LSIQRDFAAA VMVHDPSRMK IMSDGKWVPR KVLGAVPHDI 600 GISDPWFELN AYNLYDTDRW KDLNSKFVLQ VYRDMVATGD KNFARAVWPA VYIAIAFLDQ 660 FDKDGDGMIE NDGFPDQTYD AWSVTGVSAY CGGLWVAALQ AASAMAREVG DSMTADYFWF 720 KFQKAKAVYD KLWNGSYFNY DNSGGSSSSS IQADQLAGQW YARACGLQPI VDDEKARSAL 780 EKVYNFNVLK VKEGKCGAVN GMLPDGRVDM SAMQSREIWA GVTYSVAANM IHEGMVETAF 840 NTASGIYDAA WSQEGLGYSF QTPEAWNTDE EYRSLCYMRP LAIWAMQWAL SKPELHNHDM 900 KHEEGKGTLN FEHHVGFEKV AHLLKLPEEE ASKSFLQLFF DLTCRRLYTL RLN* 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.0003 | 594 | 742 | 164 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 6.0e-18 | 161 | 451 | 300 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 1.0e-50 | 92 | 403 | 320 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 3.0e-73 | 525 | 892 | 387 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 0 | 526 | 888 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31319.1 | 0 | 1 | 953 | 1 | 953 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264575.1 | 0 | 2 | 948 | 3 | 948 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275782.1 | 0 | 1 | 953 | 17 | 969 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002525532.1 | 0 | 1 | 947 | 2 | 946 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002528846.1 | 0 | 3 | 947 | 9 | 949 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292040 | 359 | 539 | 894 | 0 |
| JG703027 | 328 | 544 | 871 | 0 |
| FC895322 | 303 | 399 | 701 | 0 |
| FC917648 | 306 | 539 | 844 | 0 |
| DY268096 | 364 | 433 | 796 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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