y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01036911001 |
Family | GH14 |
Protein Properties | Length: 613 Molecular Weight: 69763.5 Isoelectric Point: 5.4457 |
Chromosome | Chromosome/Scaffold: 2 Start: 17760098 End: 17774855 |
Description | beta-amylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 180 | 579 | 0 |
YVMLATGVINNFCQLVDPDGIRQELSHMKSLHTDGVVVDCWWGIVEGWSPQKYEWSGYRELFNIIREFKLKLQVVMAFHEYGGNGSGDVMISLPQWVLEI GKENQDIFFTDREGRRNTECLSWAIDKERVLKGRTGIEVYFDFMRSFRTEFDDLFAEGIISAVEIGLGASGELKYPSFSERMGWAYPGIGEFQCYDKYSQ QNLRKAAKLRGHSFWARGPDNAGQYNSRPHETGFFCERGDYDSYYGRFFLHWYAQSLIDHADNVLSLATLAFEETQLIVKVPAVYWWYRTASHAAELTAG YYNPTNQDGYSPVFEVLKKHSVTMKFVCSGLQITCQENDDAFADPEGLSWQVLNSAWDRGLTVAGENAVPCYDREGYMRIAEIAKPRNDPDRRHLSFFVY |
Full Sequence |
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Protein Sequence Length: 613 Download |
MKTVWKNGKK EREKEKERTK LRERHRRAIT SRMLAGLRQY GNFPLPARAD MNDVLAALAR 60 EAGWTVEADG TTYRQSPPPS QMATFPVRSV ESPLSASSLR NCSAKGSLDC QPSVLRIDES 120 LSPASLDSVV VSERDTKSEK YTSTSPISSA ECLEADQLMR DVRSGEHEND FTGTPYVPVY 180 VMLATGVINN FCQLVDPDGI RQELSHMKSL HTDGVVVDCW WGIVEGWSPQ KYEWSGYREL 240 FNIIREFKLK LQVVMAFHEY GGNGSGDVMI SLPQWVLEIG KENQDIFFTD REGRRNTECL 300 SWAIDKERVL KGRTGIEVYF DFMRSFRTEF DDLFAEGIIS AVEIGLGASG ELKYPSFSER 360 MGWAYPGIGE FQCYDKYSQQ NLRKAAKLRG HSFWARGPDN AGQYNSRPHE TGFFCERGDY 420 DSYYGRFFLH WYAQSLIDHA DNVLSLATLA FEETQLIVKV PAVYWWYRTA SHAAELTAGY 480 YNPTNQDGYS PVFEVLKKHS VTMKFVCSGL QITCQENDDA FADPEGLSWQ VLNSAWDRGL 540 TVAGENAVPC YDREGYMRIA EIAKPRNDPD RRHLSFFVYQ QPSPLVERTI WFSELDYFIK 600 CMHGEIAGYL DP* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 2.0e-105 | 177 | 584 | 415 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 6.0e-120 | 177 | 579 | 407 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-150 | 176 | 605 | 436 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 28 | 611 | 585 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 28 | 605 | 608 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29216.1 | 0 | 1 | 612 | 1 | 612 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199343.1 | 0 | 19 | 606 | 96 | 684 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002270680.1 | 0 | 12 | 612 | 70 | 670 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304400.1 | 0 | 19 | 605 | 86 | 667 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519919.1 | 0 | 21 | 605 | 85 | 665 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdq_A | 0 | 176 | 605 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1wdp_A | 0 | 176 | 605 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1q6c_A | 0 | 176 | 605 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 176 | 605 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1wds_A | 0 | 176 | 605 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EB439624 | 285 | 223 | 507 | 0 |
JG649066 | 276 | 221 | 496 | 0 |
CF210586 | 245 | 369 | 613 | 0 |
HO807244 | 278 | 328 | 605 | 0 |
GO367915 | 286 | 188 | 473 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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