| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01037211001 |
| Family | GH5 |
| Protein Properties | Length: 457 Molecular Weight: 51874.2 Isoelectric Point: 9.5914 |
| Chromosome | Chromosome/Scaffold: 18 Start: 27929370 End: 27938714 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 48 | 364 | 1.2e-33 |
| FNGFNSYWMMHVATEPSERYKVSNTFREAADAGLSVCRTWAFSDGGDRALQISPGTYDERVFQALDFVISEARRYGIRLILSFVNNYKDYGGRPQYVEWA RNAGVNVNGEDDFYTTPTVKEYYKNHVKRVITRFNTITRIVYKDDPTIMAWELMNEPRCQADSSEKMVNGWVQEMASFVKSLDKNHLLEIGMEGFYGDSM PEKKVNNPGYQVGTDFISNNLIKEIDFTTIHAYPDIWLSGQNESAQMAFMQRWMQSHSIDSKGILKKPLVMAEFGKSSKGQGYSLGARDQYLSTVYQSMN NFESTGGGISGSLVWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 457 Download |
| MSRFHKVGYV VGVLITLALV CQARVHSHGG FVRTEGTRFV LGGSSSLFNG FNSYWMMHVA 60 TEPSERYKVS NTFREAADAG LSVCRTWAFS DGGDRALQIS PGTYDERVFQ ALDFVISEAR 120 RYGIRLILSF VNNYKDYGGR PQYVEWARNA GVNVNGEDDF YTTPTVKEYY KNHVKRVITR 180 FNTITRIVYK DDPTIMAWEL MNEPRCQADS SEKMVNGWVQ EMASFVKSLD KNHLLEIGME 240 GFYGDSMPEK KVNNPGYQVG TDFISNNLIK EIDFTTIHAY PDIWLSGQNE SAQMAFMQRW 300 MQSHSIDSKG ILKKPLVMAE FGKSSKGQGY SLGARDQYLS TVYQSMNNFE STGGGISGSL 360 VWQLMAEGMD SYGDGYGIIL SQDASTRGVI SAQSHKMTTF RHMLLGRKHG KRKMLIYSYL 420 KKKKMYFSII PTFTLYFLGR MMSTCPDFFK KKNVFR* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2730 | BglC | 3.0e-6 | 77 | 205 | 134 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 3.0e-11 | 72 | 342 | 278 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 1.0e-23 | 73 | 377 | 310 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC08208.1 | 0 | 13 | 415 | 18 | 421 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
| EMBL | CAN71995.1 | 0 | 1 | 411 | 1 | 411 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI17039.1 | 0 | 1 | 456 | 1 | 456 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002269954.1 | 0 | 1 | 411 | 1 | 411 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002270023.1 | 0 | 1 | 403 | 1 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 27 | 398 | 2 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 40 | 376 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 40 | 376 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 40 | 376 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 40 | 376 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
