| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01037213001 |
| Family | GH5 |
| Protein Properties | Length: 340 Molecular Weight: 38253.4 Isoelectric Point: 8.0573 |
| Chromosome | Chromosome/Scaffold: 18 Start: 27922457 End: 27924085 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 43 | 324 | 2.5e-31 |
| NGSPFFFNGFNSYWMMNVAADPSQRSKVSDVFSQAAAVRLSVCRTWAFNDGGTQALQISPGVYDERVFQGLDFVISEARKNGVRLILSLSNNYKDFGGRP QYVSWARNAGAPVNSDDDFYTNEVVKGYYKNHVKRVLTRINTITRVAYKDDPTIMAWELINEPRCQVDYSGKTLNGWIQEMASFVKSIDSNHLLTVGMEG FYGDSMPEKKAINPGYQVGTDFISNHLIREIDFSTIHAYPDIWLSGKDDSSQMAFMLRWTTSHLTDSETIIKKPMVFSEFGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 340 Download |
| MAYFGRIISF SVLFLLVALA CEARVLLQSS GFVQTRNTQF TLNGSPFFFN GFNSYWMMNV 60 AADPSQRSKV SDVFSQAAAV RLSVCRTWAF NDGGTQALQI SPGVYDERVF QGLDFVISEA 120 RKNGVRLILS LSNNYKDFGG RPQYVSWARN AGAPVNSDDD FYTNEVVKGY YKNHVKRVLT 180 RINTITRVAY KDDPTIMAWE LINEPRCQVD YSGKTLNGWI QEMASFVKSI DSNHLLTVGM 240 EGFYGDSMPE KKAINPGYQV GTDFISNHLI REIDFSTIHA YPDIWLSGKD DSSQMAFMLR 300 WTTSHLTDSE TIIKKPMVFS EFGKSSKTRD IVQVQGIHS* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.002 | 189 | 269 | 92 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam02449 | Glyco_hydro_42 | 0.0005 | 98 | 212 | 123 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam00150 | Cellulase | 1.0e-5 | 102 | 328 | 229 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 3.0e-6 | 79 | 294 | 222 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| COG3934 | COG3934 | 2.0e-21 | 113 | 325 | 213 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI17041.1 | 0 | 1 | 339 | 1 | 339 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI17044.1 | 0 | 21 | 327 | 84 | 373 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002270023.1 | 0 | 1 | 327 | 1 | 327 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272344.1 | 0 | 1 | 327 | 1 | 326 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272567.1 | 0 | 1 | 327 | 1 | 327 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 29 | 328 | 3 | 299 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 42 | 323 | 22 | 309 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 42 | 323 | 22 | 309 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 42 | 323 | 22 | 309 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 42 | 323 | 22 | 309 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
