| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01037214001 |
| Family | GH5 |
| Protein Properties | Length: 404 Molecular Weight: 45553.6 Isoelectric Point: 8.0148 |
| Chromosome | Chromosome/Scaffold: 18 Start: 27919150 End: 27920966 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 43 | 364 | 4.8e-32 |
| DGSPFFFNGFNSYWMMNVAADPSQRNKISEVFGQATASRLSVCRTWAFNDGGNQALQISPGVYDERVFQGLDFVISEAKRYGVRLILSLSNNYKDFGGRP QYVNWAKSAGAPVNKDDDFYTNEVVKGYYKNHVKRVLTRINTITRVAYKDDPTIMAWELINEPRCQVDYSGKTLNGWIQEMATYVKSIDNKHLLTVGMEG FYGDSMPEKKAINPGYQVGTDFISNHLIKEIDFTTIHAYPDIWLSGKDDSSQMAFMQRWTMSHWTDSRTIIKKPMVFSEFGKSSKDPGYSLSARDSFLNA VYTNIYNFARNGGIGGGLVWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 404 Download |
| MAYYRRSSLL SVLFLLLALV CEARVLLQSP GFVQTQNTQF VLDGSPFFFN GFNSYWMMNV 60 AADPSQRNKI SEVFGQATAS RLSVCRTWAF NDGGNQALQI SPGVYDERVF QGLDFVISEA 120 KRYGVRLILS LSNNYKDFGG RPQYVNWAKS AGAPVNKDDD FYTNEVVKGY YKNHVKRVLT 180 RINTITRVAY KDDPTIMAWE LINEPRCQVD YSGKTLNGWI QEMATYVKSI DNKHLLTVGM 240 EGFYGDSMPE KKAINPGYQV GTDFISNHLI KEIDFTTIHA YPDIWLSGKD DSSQMAFMQR 300 WTMSHWTDSR TIIKKPMVFS EFGKSSKDPG YSLSARDSFL NAVYTNIYNF ARNGGIGGGL 360 VWQLMAEGMQ SYDDGYEIVL SQTPSTSGLV TQQSNKMIAL DRV* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 0.006 | 98 | 212 | 138 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam12876 | Cellulase-like | 0.003 | 189 | 269 | 92 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| COG2730 | BglC | 0.0007 | 78 | 206 | 134 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 2.0e-5 | 145 | 328 | 193 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 5.0e-23 | 113 | 376 | 264 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC08208.1 | 0 | 1 | 403 | 1 | 409 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
| EMBL | CBI17044.1 | 0 | 9 | 403 | 72 | 449 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002270023.1 | 0 | 1 | 403 | 1 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272344.1 | 0 | 1 | 403 | 1 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272567.1 | 0 | 1 | 403 | 1 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 32 | 400 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 41 | 387 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 41 | 387 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 41 | 387 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 41 | 387 | 21 | 374 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
