| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01037215001 |
| Family | GH5 |
| Protein Properties | Length: 404 Molecular Weight: 45194 Isoelectric Point: 6.4017 |
| Chromosome | Chromosome/Scaffold: 18 Start: 27912068 End: 27913691 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 43 | 362 | 1.7e-32 |
| NGSPFFFNGFNSYWMMNVAADPSQRSKVSDVFSQATAARLSVCRTWAFNDGGSQALQISPGVYDERVFQGLDFVISEARKNGVHLILSLSNNYKDFGGRP QYVSWARNAGAPVNSDDDFYTNEVVKGYYKNHVKRVLTRINTITRVAYKDDPTIMAWELINEPRCQVDYSGKTINGWIQEMASYVKSIDNNHLLTVGMEG FYGDSMPEKKAINPGYQVGTDFISNHLVKEIDFTTIHAYPDIWLSGKDDSSQMAFMQRWMTSHLTDSETIIKKPMVFSEFGKSSKDQGYSISARDTFLNA VYTNIYNFARSGGIGGGLVW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 404 Download |
| MACFSRITSF SVLFLLVALA CEARVLLQSS GFVQTRNTQF ILNGSPFFFN GFNSYWMMNV 60 AADPSQRSKV SDVFSQATAA RLSVCRTWAF NDGGSQALQI SPGVYDERVF QGLDFVISEA 120 RKNGVHLILS LSNNYKDFGG RPQYVSWARN AGAPVNSDDD FYTNEVVKGY YKNHVKRVLT 180 RINTITRVAY KDDPTIMAWE LINEPRCQVD YSGKTINGWI QEMASYVKSI DNNHLLTVGM 240 EGFYGDSMPE KKAINPGYQV GTDFISNHLV KEIDFTTIHA YPDIWLSGKD DSSQMAFMQR 300 WMTSHLTDSE TIIKKPMVFS EFGKSSKDQG YSISARDTFL NAVYTNIYNF ARSGGIGGGL 360 VWQLMVEGMQ SYDDGYDIVL SQNPSTSGII TQQSNKMIAL DHV* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.008 | 189 | 269 | 92 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam02449 | Glyco_hydro_42 | 0.0004 | 98 | 212 | 123 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam00150 | Cellulase | 0.0003 | 102 | 343 | 250 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 0.0001 | 78 | 206 | 129 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| COG3934 | COG3934 | 2.0e-23 | 113 | 377 | 270 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI17041.1 | 0 | 1 | 327 | 1 | 327 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI17044.1 | 0 | 21 | 403 | 84 | 449 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002270023.1 | 0 | 1 | 403 | 1 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272344.1 | 0 | 1 | 403 | 1 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272567.1 | 0 | 1 | 403 | 1 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 32 | 400 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 41 | 323 | 21 | 309 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 41 | 323 | 21 | 309 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 41 | 323 | 21 | 309 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 41 | 323 | 21 | 309 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
