| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01037216001 |
| Family | GH5 |
| Protein Properties | Length: 450 Molecular Weight: 50372 Isoelectric Point: 6.8505 |
| Chromosome | Chromosome/Scaffold: 18 Start: 27892345 End: 27911348 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 106 | 410 | 2.3e-21 |
| NGSPFFFNGFNSYWMMNVAADPSQRSKVSDVFSQAAAARLSVCRTWAFNDGGTQALQISPGVYDERVFQGLDFVISEAKKNGVRLILSLSNNYKDFGGRP QYVNWARNAGAPVNSDDDFYANEVVKGYYKNHVKRVLTRINTITRPRCQVDYSGKTLNGWIQEMASFVKSIDSNHLLTVGMEGFYGDSMPEKKAINPGYQ VGTDFISNHLIKEIDFSTIHAYPDIWLSGKDDSSQMAFMLRWMTSHLTDSETIINKPMVFSEFGKSSKDPGYSLSARDSFLNAVYTNIYNFARSGGIGGG LVWQL | |||
| Full Sequence |
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| Protein Sequence Length: 450 Download |
| MLIFGDNPPF VSHRLITAFM APLIHSYAHT LHWTLSECLS INVYFWIKLA LVIAFHSFSI 60 NFWESENSFN PLLFGAFSSC SPTCEARVLL QSSGFVQTRN TQFILNGSPF FFNGFNSYWM 120 MNVAADPSQR SKVSDVFSQA AAARLSVCRT WAFNDGGTQA LQISPGVYDE RVFQGLDFVI 180 SEAKKNGVRL ILSLSNNYKD FGGRPQYVNW ARNAGAPVNS DDDFYANEVV KGYYKNHVKR 240 VLTRINTITR PRCQVDYSGK TLNGWIQEMA SFVKSIDSNH LLTVGMEGFY GDSMPEKKAI 300 NPGYQVGTDF ISNHLIKEID FSTIHAYPDI WLSGKDDSSQ MAFMLRWMTS HLTDSETIIN 360 KPMVFSEFGK SSKDPGYSLS ARDSFLNAVY TNIYNFARSG GIGGGLVWQL MAEGMQSYDD 420 GYEIVLSQNP STSSVITQQS NKMAVLDRV* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3934 | COG3934 | 3.0e-15 | 176 | 422 | 256 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI17041.1 | 0 | 84 | 373 | 21 | 327 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI17044.1 | 0 | 1 | 449 | 1 | 449 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002270023.1 | 0 | 84 | 449 | 21 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272344.1 | 0 | 72 | 449 | 9 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272567.1 | 0 | 84 | 449 | 21 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 95 | 446 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 2e-35 | 104 | 435 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 2e-35 | 104 | 435 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 2e-35 | 104 | 435 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 2e-35 | 104 | 435 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EC937931 | 249 | 219 | 450 | 0 |
| DV157927 | 288 | 177 | 446 | 0 |
| JK974111 | 372 | 94 | 446 | 0 |
| HO794665 | 381 | 86 | 446 | 0 |
| DT755744 | 288 | 73 | 343 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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