| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01037348001 |
| Family | CE8 |
| Protein Properties | Length: 260 Molecular Weight: 28009.2 Isoelectric Point: 8.7798 |
| Chromosome | Chromosome/Scaffold: 6 Start: 15367501 End: 15369297 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 1 | 244 | 0 |
| MLVGDGIGKTIVTGSKSVGGGSTTFKSATVAVVGDGFIARGMTFRNTAGASNHQSVALRSGSDLSVYYQCSFEGYQDTLYTYSERQFYRGCDIYGTVDFI FGNAAVVFQNCNIYARNPPNKINTVTAQGRTDPNQNTGISIHDCKVTAASDLKPVQGSVKTYLGRPWKEYSRTVFLKTYLDSLINSAGWLEWSGNFALNT LYYGEYMNTGDGSSTSGRVKWAGYHVITSSTEAAKFTVGNFISG | |||
| Full Sequence |
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| Protein Sequence Length: 260 Download |
| MLVGDGIGKT IVTGSKSVGG GSTTFKSATV AVVGDGFIAR GMTFRNTAGA SNHQSVALRS 60 GSDLSVYYQC SFEGYQDTLY TYSERQFYRG CDIYGTVDFI FGNAAVVFQN CNIYARNPPN 120 KINTVTAQGR TDPNQNTGIS IHDCKVTAAS DLKPVQGSVK TYLGRPWKEY SRTVFLKTYL 180 DSLINSAGWL EWSGNFALNT LYYGEYMNTG DGSSTSGRVK WAGYHVITSS TEAAKFTVGN 240 FISGNSWLPS TNVPFTSGL* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 2.0e-122 | 1 | 259 | 260 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 2.0e-125 | 1 | 259 | 260 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02170 | PLN02170 | 1.0e-125 | 1 | 259 | 259 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 4.0e-139 | 1 | 259 | 260 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-154 | 1 | 245 | 246 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN76835.1 | 0 | 1 | 259 | 239 | 497 | hypothetical protein [Vitis vinifera] |
| EMBL | CAN83663.1 | 0 | 1 | 259 | 254 | 512 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI24284.1 | 0 | 1 | 259 | 1 | 259 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265599.1 | 0 | 1 | 259 | 254 | 512 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002265740.1 | 0 | 1 | 259 | 422 | 680 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 1 | 259 | 60 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 1 | 259 | 56 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 1e-17 | 16 | 216 | 77 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-17 | 16 | 216 | 77 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 1e-17 | 16 | 194 | 77 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GD253122 | 233 | 28 | 260 | 0 |
| EL463457 | 233 | 28 | 260 | 0 |
| JK801707 | 223 | 38 | 260 | 0 |
| GR837562 | 224 | 37 | 260 | 0 |
| JK801802 | 241 | 1 | 241 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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