| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01037832001 |
| Family | GH10 |
| Protein Properties | Length: 558 Molecular Weight: 61348.3 Isoelectric Point: 7.652 |
| Chromosome | Chromosome/Scaffold: 3 Start: 7389633 End: 7402240 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 202 | 467 | 0 |
| AKRSFPFGAVISDYILQNTAFQNWFTSRFSVATFANEMKWYSTENSRGVENYKVADDMLQFCKQNGIAVRGHNILWDDPKYQPSWVNSLSPGDLQAAVDR RINSIASRYKGQVIAWDVVNENLHFSFFEDRLGASASAAAFQKTRQIDGTVELFMNEYNTIEERGDGASSPAKYLQKLGEIQAFLGGGSGPLAIGLEGHF GSAPNLPYVRSSIDTLAAKNLPIWVTEVDVSNMTDQAMHFQQILEEVHAHPAVKGIVTWGTWDPRG | |||
| Full Sequence |
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| Protein Sequence Length: 558 Download |
| MVLLKTKKYN FQCLEKPLRP QYGGGMILNP DLNDGLKGWS VSGGAKIEER VSGGGNRFIV 60 AHSRSHKNDS VSQKLYMKKD KLYTFSAWIQ VSSRSASVAA AFRTNGGVKY AGAIIAETGC 120 WSMLKGGLTV EGSGPAQLYF ESNDTSVEIW VDSVSLQPFT KEEWRTHQDQ SVEKTRKTKV 180 RLQAVDGRGN PVAGAKMAVT LAKRSFPFGA VISDYILQNT AFQNWFTSRF SVATFANEMK 240 WYSTENSRGV ENYKVADDML QFCKQNGIAV RGHNILWDDP KYQPSWVNSL SPGDLQAAVD 300 RRINSIASRY KGQVIAWDVV NENLHFSFFE DRLGASASAA AFQKTRQIDG TVELFMNEYN 360 TIEERGDGAS SPAKYLQKLG EIQAFLGGGS GPLAIGLEGH FGSAPNLPYV RSSIDTLAAK 420 NLPIWVTEVD VSNMTDQAMH FQQILEEVHA HPAVKGIVTW GTWDPRGCYR MCLTDGNFNN 480 LPTGDVLDKI LRQWSIAGMV GVTDANGVFE ASLFHGDYEV TISHPTVMKS SLTQSFKVAP 540 SADTSHQTTV LLVEVSP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 1.0e-31 | 209 | 471 | 297 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 4.0e-57 | 200 | 479 | 304 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 5.0e-78 | 239 | 487 | 273 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI22444.1 | 0 | 12 | 556 | 9 | 551 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI22449.1 | 0 | 1 | 557 | 1 | 557 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264556.1 | 0 | 10 | 556 | 117 | 657 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264652.1 | 0 | 12 | 557 | 38 | 583 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264837.1 | 0 | 10 | 556 | 53 | 597 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 3e-31 | 208 | 487 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1i1x_A | 8e-27 | 228 | 493 | 38 | 303 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1i1w_A | 8e-27 | 228 | 493 | 38 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 2e-26 | 228 | 493 | 38 | 303 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1k6a_A | 3e-26 | 230 | 493 | 40 | 303 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX266128 | 274 | 222 | 494 | 0 |
| GE471597 | 299 | 140 | 437 | 0 |
| GR150167 | 264 | 16 | 279 | 0 |
| GR187811 | 253 | 275 | 526 | 0 |
| EX266128 | 56 | 499 | 546 | 0.042 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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