| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01037844001 |
| Family | GH3 |
| Protein Properties | Length: 897 Molecular Weight: 98691.6 Isoelectric Point: 6.8036 |
| Chromosome | Chromosome/Scaffold: 3 Start: 7219508 End: 7223633 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 98 | 350 | 0 |
| GISRLGVPDYEWWSEALHGVSNSGIGVHFHDPIPAVTIFPAVILSAASFNESLWYTMGQVVSTEGRAMYNVGQAGLTYWSPNVNIFRDPRWGRGQETPGE DPLVVSRYAVNYVRGLQEVGKEGNFAADRLKVSSCCKHYTAYDVDKWKGVDRFHFDAKVTLQDLEDTYQPPFKSCVEEGHVSSVMCSYNRVNGVPTCANP ELLKGVIRDQWGLDGYIVSDCDSIMVYHERMNYTETPEDAVALALKAGLNLNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 897 Download |
| MAFGWPSTIK NNASASDHLP SKEAMKKNQL ILLPIFLSLP LLAISQPTHR YACDRTDPNS 60 SQFPFCNTSL PYQDRASDLV SRLTLQEKAK QLINSATGIS RLGVPDYEWW SEALHGVSNS 120 GIGVHFHDPI PAVTIFPAVI LSAASFNESL WYTMGQVVST EGRAMYNVGQ AGLTYWSPNV 180 NIFRDPRWGR GQETPGEDPL VVSRYAVNYV RGLQEVGKEG NFAADRLKVS SCCKHYTAYD 240 VDKWKGVDRF HFDAKVTLQD LEDTYQPPFK SCVEEGHVSS VMCSYNRVNG VPTCANPELL 300 KGVIRDQWGL DGYIVSDCDS IMVYHERMNY TETPEDAVAL ALKAGLNLNC GSYLGDYTKN 360 AVNLGKVKES IVNQALIYNY IVLMRLGFFD GDPTMLPFGK MGPSDVCTVD HQLLALDAAK 420 QGIVLLHNNG ALPLSPNTTK TLAVIGPNAD ATNTMLSNYA GVPCRYTSPL QGLQKYVSAV 480 SYEKGCANVS CSEETLIEGA ASIASMADAT VVVVGLDLFI EAEDLDRVNL TLPGFQEKLV 540 MEAAKAANGT VILVVMSAGP VDISFVKNVS KIGGILWVGY PGQAGGDAIS QVIFGDYNPG 600 GRSPFTWYPQ EYVDQVPMTD MNMRPNATSN FPGRTYRFYT GKSLYQFGHG LSYSTFYKNL 660 SNIDIVIGVK NAGEIDGTHV VLAFWKPPRS GVRGAPGVEL VGFERVEVKR GKTEMVGMRL 720 DVCGKISNVD EEGKRKLVMG MHTLVVGSSS EQQARHHVNF RLAKSEPHMI KTPTTKSQCH 780 SESFTRMELQ VKPTLIITFF LTILIHSRLV HPRNLAGSPS PAVPVNGEPI GMEKNLFERG 840 SEKARRGSFP ARCHSKCNQC MPCMPVEVTV RVEEQEENEY YPQVWRCMCH DTMFSP* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 1.0e-52 | 98 | 453 | 363 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 5.0e-61 | 423 | 655 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-63 | 84 | 375 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 3.0e-77 | 58 | 750 | 786 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 58 | 747 | 738 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB02547.1 | 0 | 25 | 770 | 1 | 782 | beta-1,4-xylosidase [Arabidopsis thaliana] |
| EMBL | CAN82161.1 | 0 | 25 | 896 | 1 | 925 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI22460.1 | 0 | 1 | 896 | 1 | 896 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264114.1 | 0 | 1 | 770 | 1 | 818 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002527511.1 | 0 | 48 | 765 | 22 | 787 | Beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 176 | 720 | 128 | 696 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 3u48_A | 0 | 176 | 720 | 128 | 696 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 3u4a_B | 0 | 176 | 720 | 128 | 696 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 3u4a_A | 0 | 176 | 720 | 128 | 696 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 4i3g_B | 1e-37 | 72 | 485 | 50 | 441 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES793662 | 323 | 310 | 632 | 0 |
| DY932965 | 307 | 63 | 369 | 0 |
| DT755899 | 299 | 91 | 389 | 0 |
| EX330260 | 301 | 190 | 489 | 0 |
| CO125420 | 265 | 368 | 632 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
