| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01038546001 |
| Family | CE8 |
| Protein Properties | Length: 394 Molecular Weight: 43974.3 Isoelectric Point: 9.9916 |
| Chromosome | Chromosome/Scaffold: 16 Start: 21975853 End: 21979103 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 37 | 333 | 0 |
| DIIVSQDGNGTYKTITEAIKKAPEYSSRRTIIYVKAGRYEENNLKVGRKKTNLMFIGDGKGKTIITGGKSVFNNLTTFHTASFAATGAGFIARDMTFENW AGPGKHQAVALRVGADHGVVYRCNIIGYQDTLYVHSQRQFFRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHACRI LPAGDLAPVKGSFPTYLGRPWKLYSRTVYMLSYMGDHIHPKGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVNWPGYRVITSVVEATKFTVGQFIY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 394 Download |
| MQDSDISANQ DSTGFPKWLT RRERSLLQMP VPAIQADIIV SQDGNGTYKT ITEAIKKAPE 60 YSSRRTIIYV KAGRYEENNL KVGRKKTNLM FIGDGKGKTI ITGGKSVFNN LTTFHTASFA 120 ATGAGFIARD MTFENWAGPG KHQAVALRVG ADHGVVYRCN IIGYQDTLYV HSQRQFFREC 180 DIYGTVDFIF GNAAVVFQNC SLYARKPMAQ QKNTITAQNR KDPNQNTGIS IHACRILPAG 240 DLAPVKGSFP TYLGRPWKLY SRTVYMLSYM GDHIHPKGWL EWNTTFALDT LYYGEYMNYG 300 PGGAVGQRVN WPGYRVITSV VEATKFTVGQ FIYGSSWLPS TGVAFLAGLS TLLRKKKKVK 360 LNRICVLVSV SVSVGFEDNK YKSYWMPTHD AIY* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02506 | PLN02506 | 1.0e-143 | 7 | 350 | 344 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 1.0e-147 | 7 | 349 | 343 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-164 | 12 | 349 | 338 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 0 | 1 | 350 | 350 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 37 | 335 | 299 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI23005.1 | 0 | 1 | 393 | 1 | 393 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_190491.1 | 0 | 15 | 350 | 262 | 597 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002278061.1 | 0 | 1 | 350 | 247 | 596 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
| RefSeq | XP_002317777.1 | 0 | 2 | 349 | 206 | 550 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321999.1 | 0 | 2 | 350 | 259 | 604 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 37 | 349 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 34 | 349 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-21 | 41 | 307 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-21 | 41 | 307 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 7e-21 | 41 | 307 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
