y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma01g01010.1 |
Family | CE8 |
Protein Properties | Length: 380 Molecular Weight: 41593.5 Isoelectric Point: 9.0389 |
Chromosome | Chromosome/Scaffold: 01 Start: 663902 End: 668594 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 82 | 373 | 0 |
HVDKDPGAGDFTSIQEAIDSLPFINLVRVVIKVHAGVYTEKVNIPPLKSYITIEGAGTDKTIVKWGDTAQTPGPNGRPLGTYGSATFAVNSPYFLAKNIT FQNTTPVPAPGAVGKQAVALRISADTAAFVGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQNTGAVTAQGRSSMLEDTGFS FVNCKVTGSGALYLGRAWGPFSRVVFAYTFMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGLGASFAGRVPWSRELTDEEAAPFLSLSFIDG |
Full Sequence |
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Protein Sequence Length: 380 Download |
MSNLHYMFIL FAVLLVQNPS RIHCHTKGIR PRLSAGKGLS TNITRVQYSE QQFMKWVNFV 60 GSLKHSVFKS AKNKLVASYT LHVDKDPGAG DFTSIQEAID SLPFINLVRV VIKVHAGVYT 120 EKVNIPPLKS YITIEGAGTD KTIVKWGDTA QTPGPNGRPL GTYGSATFAV NSPYFLAKNI 180 TFQNTTPVPA PGAVGKQAVA LRISADTAAF VGCKFLGAQD TLYDHLGRHY YKDCYIEGSV 240 DFIFGNSLSL FEGCHVHAIA QNTGAVTAQG RSSMLEDTGF SFVNCKVTGS GALYLGRAWG 300 PFSRVVFAYT FMDNIIIPKG WYNWGDPNRE MTVFYGQYKC TGLGASFAGR VPWSRELTDE 360 EAAPFLSLSF IDGTEWIKV* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 1.0e-115 | 81 | 378 | 298 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-117 | 80 | 377 | 300 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 1.0e-118 | 80 | 378 | 307 | + probable pectinesterase | ||
PLN02634 | PLN02634 | 4.0e-119 | 40 | 377 | 339 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 0 | 34 | 378 | 345 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 1 | 379 | 1 | 379 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_001044216.1 | 0 | 19 | 379 | 20 | 384 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_197474.1 | 0 | 20 | 379 | 24 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330522.1 | 0 | 1 | 379 | 1 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 7 | 379 | 10 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 88 | 378 | 15 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 7.9874e-44 | 88 | 378 | 11 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 1e-28 | 76 | 372 | 28 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 7e-20 | 92 | 365 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 7e-20 | 92 | 365 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |