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Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma01g02620.1 |
Family | CBM57 |
Protein Properties | Length: 1063 Molecular Weight: 119370 Isoelectric Point: 7.969 |
Chromosome | Chromosome/Scaffold: 01 Start: 2146051 End: 2152449 |
Description | Di-glucose binding protein with Kinesin motor domain |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 61 | 204 | 1.9e-32 |
MFVNAGGDAFSEAAGGITFLGDTYFDGGNVMRTNEQIVEGGDYPFIYQSARLGSFCYRFANLPPGDYVVDLHFVEIININGPKGMRVFNVYIQDEKVLSE LDIYAVVGANKPLQMVDSRVSVKDDGVILIRFESISGSPVVSGI |
Full Sequence |
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Protein Sequence Length: 1063 Download |
MDPTQSNDVQ QYPQTLISEP KDSSMHDANE SLFDSMVCDS SSRLVPTGLT RSGNAEEECF 60 MFVNAGGDAF SEAAGGITFL GDTYFDGGNV MRTNEQIVEG GDYPFIYQSA RLGSFCYRFA 120 NLPPGDYVVD LHFVEIININ GPKGMRVFNV YIQDEKVLSE LDIYAVVGAN KPLQMVDSRV 180 SVKDDGVILI RFESISGSPV VSGICIRRAT KASVPQVTSD YIKCSSCAAQ IEIPSSQMKV 240 MQAKSTAKYK SKIKELTMQC DLKAKECYEA WMSLTAKNEQ LEAVQMELDK VTFKLLTTDQ 300 TVEKQAESLR NISNRYELDK KKWAEAINSL QEKIKLMKSD YSKLSFEAHE CVDSIPELNK 360 MVFAVQELVK QCEDLKVKYS EEMAKRKKLF NEVQEAKGNI RVFCRCRPLN KAEISAGSNT 420 VVDFDAAKEG CLGILTSGST KKSFRFDRVY TPKDDQVDVF ADASSMVISV LDGYNVCIFA 480 YGQTGTGKTF TMEGTQQNRG VNYRTLEHLF KVSKERSETF SYDISVSVIE VYNEQIRDLL 540 ATGQTSKRLE IKQASEGFHH VPGVVEARID NINEVWNVLQ VGNNARAVGS NNVNEHSSRS 600 HCLLCVTVKA KNLLSGESTK SKLWLVDLAG SERLAKTDVQ GERLKEAQNI NRSLSALGDV 660 ISALAAKSSH IPYRNSKLTH LLQDSLGGDS KTLMFVQISP SDQDVGETLS SLNFATRVRG 720 VELGPVKKQI DTSEVQKMKA MLEKARSECR IKDESMRKLE ENLQSLESKA KGKDQIYKNL 780 QEKIQELEGQ IELKRAMQND SEKKISQLSA KLRGKEETCG TLQQKVKELE KKMKEQLQSE 840 SASFQQKVWD LEKKLEDQMQ GSESESAILK DKIKELERKL KEQEQSSMSL LRQQMKELED 900 RYREREQQWQ QTHSFVDAVK AATPDVCKSC MREECPSEIE TGILRCSDSV NRQISQGSSL 960 FKGNDSTHKI SQGSLFKEND STHKIRSKRS NDENNFVMPS SLLHDRRVAR KSDPPKIVRG 1020 VRPTPRPVTA NPAPVSHKRG STSRDQVQGI KERDTKKKIW SR* 1080 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd01369 | KISc_KHC_KIF5 | 4.0e-104 | 399 | 717 | 324 | + Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup. Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. | ||
cd00106 | KISc | 2.0e-121 | 399 | 719 | 329 | + Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. | ||
smart00129 | KISc | 2.0e-134 | 399 | 727 | 336 | + Kinesin motor, catalytic domain. ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division. | ||
pfam00225 | Kinesin | 3.0e-138 | 405 | 721 | 326 | + Kinesin motor domain. | ||
cd01366 | KISc_C_terminal | 6.0e-177 | 397 | 724 | 330 | + Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins. Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. |
Gene Ontology | |
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GO Term | Description |
GO:0003777 | microtubule motor activity |
GO:0005524 | ATP binding |
GO:0007018 | microtubule-based movement |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63715.1 | 0 | 1 | 1046 | 1 | 1063 | hypothetical protein [Vitis vinifera] |
EMBL | CBI40845.1 | 0 | 77 | 1062 | 1 | 979 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266404.1 | 0 | 1 | 823 | 1 | 847 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266404.1 | 1e-21 | 824 | 1062 | 759 | 982 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002532381.1 | 0 | 19 | 840 | 37 | 857 | ATP binding protein, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2h58_A | 0 | 396 | 723 | 2 | 330 | A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp |
PDB | 3h4s_A | 0 | 386 | 775 | 1 | 383 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3cob_C | 0 | 394 | 742 | 1 | 347 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3cob_A | 0 | 394 | 742 | 1 | 347 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
PDB | 3cnz_B | 0 | 394 | 742 | 1 | 347 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL921658 | 258 | 489 | 746 | 0 |
DV990845 | 302 | 453 | 750 | 0 |
EL442930 | 266 | 485 | 748 | 0 |
ES865056 | 287 | 466 | 748 | 0 |
EH194227 | 337 | 532 | 868 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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