Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma01g09350.1 |
Family | CE8 |
Protein Properties | Length: 370 Molecular Weight: 40234.8 Isoelectric Point: 7.8732 |
Chromosome | Chromosome/Scaffold: 01 Start: 11294640 End: 11296592 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 71 | 356 | 0 |
VKVMQDGSGEFKTITDAINSVPNGNTKRVIVFIGAGNYNEKIKIERTKPFVTLYGVPEKMPNLTFGGTAQQYGTVDSATLIVESDYFVAANIMISNTAPR PDPKTPGGQAVALRISGDKAAFYNCKMFGFQDTICDDRNKHFFKDCLIQGTMDYIFGSGKSLYMSTELRTLGDNGITVIVAQARKSETEDNAYSFVHCDV TGTGTGTFLGRAWMSHPRVVFAYSTMSGIVNKLGWSNNNHPEHDKTVRFGEYQNTGPGADPKGRAPITKQLSETEVKPYITLAMIE |
Full Sequence |
---|
Protein Sequence Length: 370 Download |
MASKTICTTI QVTLIVAFLT TQVVFSDDNV PIPANKEQLG TWFSTNVGPL DQRKSTIDPA 60 LVAAEEGAKV VKVMQDGSGE FKTITDAINS VPNGNTKRVI VFIGAGNYNE KIKIERTKPF 120 VTLYGVPEKM PNLTFGGTAQ QYGTVDSATL IVESDYFVAA NIMISNTAPR PDPKTPGGQA 180 VALRISGDKA AFYNCKMFGF QDTICDDRNK HFFKDCLIQG TMDYIFGSGK SLYMSTELRT 240 LGDNGITVIV AQARKSETED NAYSFVHCDV TGTGTGTFLG RAWMSHPRVV FAYSTMSGIV 300 NKLGWSNNNH PEHDKTVRFG EYQNTGPGAD PKGRAPITKQ LSETEVKPYI TLAMIEGSKW 360 LLPPPTPKV* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 5.0e-79 | 75 | 361 | 287 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-79 | 75 | 361 | 298 | + pectinesterase | ||
PLN02304 | PLN02304 | 3.0e-83 | 76 | 363 | 296 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-97 | 77 | 363 | 294 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 8 | 365 | 358 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14235.1 | 0 | 1 | 248 | 1 | 248 | unknown [Glycine max] |
EMBL | CBI38547.1 | 0 | 9 | 365 | 7 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309337.1 | 0 | 4 | 365 | 5 | 367 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 10 | 365 | 7 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511043.1 | 0 | 3 | 365 | 2 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4e-36 | 71 | 361 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-35 | 73 | 361 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-18 | 63 | 238 | 1 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-18 | 63 | 238 | 1 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-18 | 63 | 238 | 1 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |