| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma01g29378.2 |
| Family | CBM57 |
| Protein Properties | Length: 968 Molecular Weight: 107445 Isoelectric Point: 6.8669 |
| Chromosome | Chromosome/Scaffold: 01 Start: 39478264 End: 39516299 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 397 | 562 | 3.9e-30 |
| HINCGGNLVTDGKKTYDDDTGETTGPASFHNDRGKNWALINNGHLFDTDRVNYYNVTNSTKLVMENVELYMNARVSPTSLTYYGFCLGNGNYTVKLHFAE IMFTDDKTYSSLGRRVFDIYIQRNLVAKDFNIAKEAGGVGKAVIKNFTVVVTSNALEIRLYWAGKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 968 Download |
| MMGVFSGFPL LFLLPFCFAS LAFGATLPED EVQALRDIAH TIGKKNWNYS VDPCTGKSNW 60 NSSEKNVVTC NCSFVNHTCH VVSIILKEQN LSGIISTDLV RLSYLQQIDF TRNYLNGTIP 120 RQLGTLNLVN ISFIGNRLTG PIPKELGNIT TLKILKLEFN QLSGSLPLEL GNLAQIEKLH 180 LTSNNFTGEL PATLARLTTL KELRIGDNQF SGAIPNFIQS WINLEKLIMH GSGLSGPIPS 240 GISILRNLTD LRVTDLNGSD SRFPQLNNMT NLLTLIFRSC NIIGSLPENL VKLTNLEILD 300 VSYNKLTGPI PSIFGDLPHL NMLFLEGNHL TGSLPRLIDR PHYVDLSYNN LSIGNNIEEL 360 QCQPGTVNLF ASFSNGNSLG NVSCLSNIPC KTSYSLHINC GGNLVTDGKK TYDDDTGETT 420 GPASFHNDRG KNWALINNGH LFDTDRVNYY NVTNSTKLVM ENVELYMNAR VSPTSLTYYG 480 FCLGNGNYTV KLHFAEIMFT DDKTYSSLGR RVFDIYIQRN LVAKDFNIAK EAGGVGKAVI 540 KNFTVVVTSN ALEIRLYWAG KGTTSIPFRS VYGPLISAIS VDPNFIPPSE SGSSSISIIR 600 VVVAVVVAGA IIILIFGILW WKRFLGWERS VARELKGFES QTSLFTLRQI KAATNNFDKS 660 LKIGEGGFGL VYKGVLSDGT VVAVKQLSTR SRQGSREFVN EIGLISALQH PCLVKLYGCC 720 MEEDQLLLIY EYMENNSLAH ALFAKNDESE KCQLRLDWQT RHRICVGIAK GLAYLHEESK 780 LKIVHRDIKA NNVLLDKDLN PKISDFGLAK LNDEDKTHLS TRIAGTYGMS NTISQPTEEC 840 FSLIDRVHLL KENGNLMEIV DKRLGEHFNK TEAMMMINVA LLCTKVSLAL RPTMSLVVSM 900 LEGRTRIQEV VLDKREVLDD DKFEIMQQYY QHRGENNIIE SQNLSDPTGE SSKLFADTSS 960 SGEQIES* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 3.0e-24 | 81 | 352 | 277 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 3.0e-41 | 52 | 375 | 353 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| smart00221 | STYKc | 2.0e-41 | 662 | 816 | 161 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. | ||
| smart00219 | TyrKc | 5.0e-42 | 662 | 818 | 163 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. | ||
| pfam11721 | Malectin | 5.0e-57 | 394 | 579 | 192 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAU10526.1 | 0 | 24 | 932 | 26 | 966 | putative receptor-like protein kinase 2 [Glycine max] |
| EMBL | CBI20124.1 | 0 | 32 | 949 | 62 | 1011 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283578.1 | 0 | 27 | 949 | 28 | 959 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002283596.1 | 0 | 31 | 949 | 64 | 1011 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002524514.1 | 0 | 5 | 942 | 3 | 973 | ATP binding protein, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ulz_A | 0 | 641 | 903 | 16 | 308 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3uim_A | 0 | 641 | 903 | 16 | 308 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
| PDB | 3tl8_H | 0 | 641 | 903 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3tl8_G | 0 | 641 | 903 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3tl8_D | 0 | 641 | 903 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
