y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma01g35500.2 |
Family | GH14 |
Protein Properties | Length: 657 Molecular Weight: 74399.8 Isoelectric Point: 6.0716 |
Chromosome | Chromosome/Scaffold: 01 Start: 47984870 End: 47990016 |
Description | beta-amylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 228 | 625 | 0 |
YVKLPAGIINKFCQLIDPEGIKQELIHIKSLNVDGVVVDCWWGIVEGWSSQKYVWSGYRELFNIIREFKLKLQVVMAFHECGGNDSSDALISLPQWVLDI GKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLISAVEVGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQ NSLRRAAKLHGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLATLAFEETKIIVKVPAVYWWYKTPSHAAELTAG YHNPTYQDGYSPVFEVLRKHAVTMKFVCLGFHLSSQEAYEPLIDPEGLSWQVLNSAWDRGLMAAGENALLCYGREGYKRLVEMAKPRNDPDCRHFSFF |
Full Sequence |
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Protein Sequence Length: 657 Download |
MKSINDDAST QDVDPQSDHS SDYLAHPNSH PEPHPQPRRP RGFAAAPVTT NTGGKGKKER 60 EKEKERTKLR ERHRRAITSR MLAGLRQYGN FPLPARADMN DVLAALAREA GWVVDADGTT 120 YRQCPPPSNV GSFAARSVES QLSGGSLRNC SVKETIENQT AVLRIDECLS PASIDSVVIA 180 ERDSKNEKYT NARPINTVDC LEADQLMQDI HSGVHENDFT STPYVSVYVK LPAGIINKFC 240 QLIDPEGIKQ ELIHIKSLNV DGVVVDCWWG IVEGWSSQKY VWSGYRELFN IIREFKLKLQ 300 VVMAFHECGG NDSSDALISL PQWVLDIGKD NQDIFFTDRE GRRNTECLSW GIDKERVLKG 360 RTGIEVYFDM MRSFRTEFDD LFAEGLISAV EVGLGASGEL KYPSFSERMG WRYPGIGEFQ 420 CYDKYLQNSL RRAAKLHGHS FWARGPDNAG HYNSMPHETG FFCERGDYDN YYGRFFLHWY 480 SQTLIDHADN VLSLATLAFE ETKIIVKVPA VYWWYKTPSH AAELTAGYHN PTYQDGYSPV 540 FEVLRKHAVT MKFVCLGFHL SSQEAYEPLI DPEGLSWQVL NSAWDRGLMA AGENALLCYG 600 REGYKRLVEM AKPRNDPDCR HFSFFVYQQP SLLQANVCLS ELDFFVKCMH GEMSDL* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 6.0e-105 | 225 | 636 | 423 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 3.0e-121 | 211 | 612 | 406 | + beta-amylase | ||
PLN02801 | PLN02801 | 4.0e-148 | 224 | 652 | 437 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 76 | 655 | 582 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 76 | 652 | 603 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29216.1 | 0 | 67 | 654 | 19 | 607 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199343.1 | 0 | 14 | 655 | 16 | 686 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002270680.1 | 0 | 60 | 654 | 70 | 665 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304400.1 | 0 | 4 | 654 | 1 | 669 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519919.1 | 0 | 9 | 652 | 5 | 665 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdq_A | 0 | 224 | 614 | 11 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byd_A | 0 | 224 | 614 | 11 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byc_A | 0 | 224 | 614 | 11 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byb_A | 0 | 224 | 614 | 11 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1bya_A | 0 | 224 | 614 | 11 | 401 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO807244 | 277 | 376 | 652 | 0 |
JG649066 | 276 | 269 | 544 | 0 |
EB439624 | 285 | 271 | 555 | 0 |
GO367915 | 286 | 236 | 521 | 0 |
FG987745 | 217 | 246 | 462 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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