| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma01g36480.1 |
| Family | GH19 |
| Protein Properties | Length: 276 Molecular Weight: 30182.6 Isoelectric Point: 5.2938 |
| Chromosome | Chromosome/Scaffold: 01 Start: 48987939 End: 48990441 |
| Description | basic chitinase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH19 | 30 | 266 | 0 |
| VSSIISASQFEQLLKHRNDQICEGKNGFYSYNAFVTAARTFDGFGTTGDVNTRKREVAAFLAQTSHETTGGGGWPNAPDGPYAWGYCFVTERDKSNNYCE ISKAPCASGKSYYGRGPLQLTHNYNYDLAGKAIHSDLINNPDLVAQDPVVSFQTAIWFWMTSQANKPSCHDVITNRWTPSSVDMAANRAPGYGVITNIIN GRIECGNGPSPASNDRIGFYKKYCEIFGLSDATNLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 276 Download |
| MKLDTIFAFI VVYILLVTSS EFPSVAADDV SSIISASQFE QLLKHRNDQI CEGKNGFYSY 60 NAFVTAARTF DGFGTTGDVN TRKREVAAFL AQTSHETTGG GGWPNAPDGP YAWGYCFVTE 120 RDKSNNYCEI SKAPCASGKS YYGRGPLQLT HNYNYDLAGK AIHSDLINNP DLVAQDPVVS 180 FQTAIWFWMT SQANKPSCHD VITNRWTPSS VDMAANRAPG YGVITNIING RIECGNGPSP 240 ASNDRIGFYK KYCEIFGLSD ATNLDCSSQK SFDQD* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3179 | COG3179 | 3.0e-11 | 81 | 195 | 134 | + Predicted chitinase [General function prediction only] | ||
| cd00442 | lysozyme_like | 2.0e-14 | 87 | 228 | 142 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
| cd00325 | chitinase_glyco_hydro_19 | 2.0e-129 | 38 | 266 | 229 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
| pfam00182 | Glyco_hydro_19 | 1.0e-130 | 38 | 266 | 230 | + Chitinase class I. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004568 | chitinase activity |
| GO:0006032 | chitin catabolic process |
| GO:0016998 | cell wall macromolecule catabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1DXJ | 0 | 29 | 272 | 1 | 240 | A Chain A, Structure Of The Chitinase From Jack Bean |
| GenBank | ABD92819.1 | 0 | 29 | 272 | 81 | 321 | class Ib chitinase [Limonium bicolor] |
| DDBJ | BAC53632.1 | 0 | 1 | 272 | 1 | 268 | cotyledoneous yieldin-like protein [Vigna unguiculata] |
| EMBL | CAA07413.1 | 0 | 1 | 272 | 1 | 268 | chitinase precursor [Canavalia ensiformis] |
| Swiss-Prot | P36907 | 0 | 29 | 272 | 79 | 319 | CHIX_PEA RecName: Full=Endochitinase; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3w3e_B | 0 | 29 | 272 | 2 | 241 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
| PDB | 3w3e_A | 0 | 29 | 272 | 2 | 241 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
| PDB | 1dxj_A | 0 | 29 | 272 | 1 | 240 | A Chain A, Structure Of The Chitinase From Jack Bean |
| PDB | 3cql_B | 0 | 30 | 272 | 2 | 242 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
| PDB | 3cql_A | 0 | 30 | 272 | 2 | 242 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| chitin degradation II | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12623 | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12624 | EC-3.2.1.14 | chitinase |
| chitin degradation III (carnivorous plants) | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
