| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma0248s00200.1 |
| Family | CE8 |
| Protein Properties | Length: 403 Molecular Weight: 44601.9 Isoelectric Point: 6.5165 |
| Chromosome | Chromosome/Scaffold: 248 Start: 65 End: 2271 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 255 | 396 | 0 |
| NVTVAIDDSGDFKSINEALKQVPEKNRKPFVIYIKEGVYQEYVEVTKKMTHVVFIGEGGKKTRISGNKNFIDGTNTYRTATVAIQGDHFVAINMGFENSA GPHKHQAVALRVQADKSIFYNCSMDGYQDTLYAHTMRQFYRD | |||
| Full Sequence |
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| Protein Sequence Length: 403 Download |
| MSEGNAGKGK KIAIIGVSTL LLVAMVVAVT IGVNLNENGS NNDIEDNKKD HVASSIKAVQ 60 TLCHPTNYEK ECEESLIAGA GNTTDPKELI KIFFNITITK IGDKLKETNI LHEIEEEPRA 120 KMALDTCKQL MDLSIGELTR SLDGINEFNL INVDKILMNL KVWLSGAVTY QDTCLDGFEN 180 TTSDAGKKMK DLLTIGMHMS SNALAIVTGL ADTVNDWNIT KSFGRRLLQD SELPSWVDQH 240 RLLNENASPF KRKPNVTVAI DDSGDFKSIN EALKQVPEKN RKPFVIYIKE GVYQEYVEVT 300 KKMTHVVFIG EGGKKTRISG NKNFIDGTNT YRTATVAIQG DHFVAINMGF ENSAGPHKHQ 360 AVALRVQADK SIFYNCSMDG YQDTLYAHTM RQFYRDAPFG IL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 1.0e-86 | 10 | 396 | 405 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 1.0e-87 | 255 | 396 | 142 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 2.0e-95 | 36 | 395 | 376 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02990 | PLN02990 | 8.0e-103 | 31 | 396 | 378 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02217 | PLN02217 | 2.0e-128 | 1 | 396 | 401 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_187212.1 | 0 | 42 | 396 | 41 | 396 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002314364.1 | 0 | 45 | 397 | 46 | 400 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318979.1 | 0 | 51 | 397 | 54 | 406 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330222.1 | 0 | 38 | 397 | 38 | 407 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512459.1 | 0 | 36 | 397 | 38 | 411 | Pectinesterase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1e-39 | 254 | 394 | 7 | 147 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 8e-39 | 255 | 397 | 4 | 146 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.00000000001 | 255 | 396 | 32 | 194 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.00000004 | 256 | 396 | 8 | 167 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.00000004 | 256 | 396 | 8 | 167 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 12 | 34 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| BE807646 | 207 | 191 | 397 | 0 |
| FG987269 | 229 | 1 | 229 | 0 |
| BM732567 | 185 | 190 | 374 | 0 |
| BE059868 | 183 | 119 | 301 | 0 |
| FG987234 | 224 | 1 | 224 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Panicum virgatum | Pavirv00036753m | Pavirv00067617m | |||
| Phaseolus vulgaris | Phvul.005G103500.1.187.314 | Phvul.005G103500.1.187.314 | |||
| Zea mays | AC212451.4_FGT009 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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