| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma02g01310.2 |
| Family | CE8 |
| Protein Properties | Length: 184 Molecular Weight: 20713.3 Isoelectric Point: 8.0955 |
| Chromosome | Chromosome/Scaffold: 02 Start: 952310 End: 953528 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 92 | 175 | 1e-28 |
| TTKKIYLGRAWGDYSRVIFSYTYMDNIVLPKGWSDWGDQKRDSRVYYGEYKCSGPGANLAGSVPWARVLTDEEAKPFIGMQFIE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 184 Download |
| MKQRIILWEE DAKSLCAKTE QCSACGWKEG GTSRGASHDR ISGTKAGFYG TQDTLYDHKG 60 LHYFNNCSIQ GSVLFIFGSA RSLYENCYLN STTKKIYLGR AWGDYSRVIF SYTYMDNIVL 120 PKGWSDWGDQ KRDSRVYYGE YKCSGPGANL AGSVPWARVL TDEEAKPFIG MQFIERDTWL 180 ASP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 4.0e-52 | 31 | 180 | 185 | + putative pectinesterase | ||
| PLN02304 | PLN02304 | 2.0e-53 | 40 | 182 | 186 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 1.0e-55 | 30 | 180 | 186 | + pectinesterase | ||
| PLN02665 | PLN02665 | 3.0e-56 | 40 | 183 | 181 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 6.0e-69 | 40 | 180 | 176 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79461.1 | 0 | 40 | 183 | 203 | 381 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_001764345.1 | 0 | 30 | 180 | 125 | 310 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001769817.1 | 0 | 30 | 180 | 164 | 350 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002320279.1 | 0 | 40 | 180 | 112 | 287 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002440102.1 | 0 | 31 | 180 | 225 | 404 | hypothetical protein SORBIDRAFT_09g026060 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 4e-17 | 52 | 182 | 131 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 7e-17 | 52 | 180 | 135 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 0.00001 | 37 | 91 | 138 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00001 | 37 | 91 | 138 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.00001 | 37 | 91 | 138 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| CF233090 | 182 | 31 | 176 | 0 |
| DT762805 | 181 | 30 | 175 | 0 |
| DT739130 | 181 | 30 | 175 | 0 |
| DT740801 | 164 | 40 | 168 | 0 |
| CD475178 | 165 | 48 | 182 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |