| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma02g09540.2 |
| Family | CE8 |
| Protein Properties | Length: 337 Molecular Weight: 37676.7 Isoelectric Point: 8.6198 |
| Chromosome | Chromosome/Scaffold: 02 Start: 7465663 End: 7470033 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 40 | 326 | 0 |
| IVVDQSGHGNFSTIQSAIDSVPSNNRYWVSIKVKAGTYREKVKIPYDKPFIILKGEGKRRTLVEWDDHNDISQSPTFAAMADNLVVKCMSFRNSYNNPIN NKHENVPAVAAMVSGDKAYFFRVGFFGVQDTLWDVAGRHYYMLCTMQGAVDFIFGAAQSLFERCSISVIGGALAPGLSGFITAQGRENSQDANGFVFKDC HVFGSGSSYLGRPWRSYARVLFYNTTMTNVVQPSGWTSSDFAGYEGRITFAEYGNFGPGSDPSKRVSWTKKLDLKTIENMASLKFID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 337 Download |
| MSLHWCCFVC LFLLVGLRAE VANAQFYRNV GNKHLPYWSI VVDQSGHGNF STIQSAIDSV 60 PSNNRYWVSI KVKAGTYREK VKIPYDKPFI ILKGEGKRRT LVEWDDHNDI SQSPTFAAMA 120 DNLVVKCMSF RNSYNNPINN KHENVPAVAA MVSGDKAYFF RVGFFGVQDT LWDVAGRHYY 180 MLCTMQGAVD FIFGAAQSLF ERCSISVIGG ALAPGLSGFI TAQGRENSQD ANGFVFKDCH 240 VFGSGSSYLG RPWRSYARVL FYNTTMTNVV QPSGWTSSDF AGYEGRITFA EYGNFGPGSD 300 PSKRVSWTKK LDLKTIENMA SLKFIDTEGW LQNQQF* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02682 | PLN02682 | 8.0e-76 | 32 | 333 | 313 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 2.0e-84 | 39 | 331 | 294 | + Probable pectinesterase | ||
| PLN02432 | PLN02432 | 4.0e-86 | 40 | 332 | 296 | + putative pectinesterase | ||
| PLN02176 | PLN02176 | 8.0e-101 | 39 | 331 | 294 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 1.0e-169 | 39 | 334 | 297 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40838.1 | 0 | 37 | 334 | 42 | 340 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189055.1 | 0 | 40 | 333 | 34 | 330 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002263748.1 | 0 | 35 | 334 | 27 | 327 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323773.1 | 0 | 40 | 334 | 1 | 287 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518106.1 | 0 | 3 | 334 | 5 | 334 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1e-38 | 40 | 307 | 9 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-33 | 41 | 307 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-19 | 37 | 303 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-19 | 37 | 303 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-19 | 37 | 303 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
