| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma02g11090.2 |
| Family | CBM57 |
| Protein Properties | Length: 637 Molecular Weight: 69953.3 Isoelectric Point: 6.823 |
| Chromosome | Chromosome/Scaffold: 02 Start: 9276566 End: 9287932 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 226 | 370 | 1.4e-23 |
| SDRFGRSWQSDSDFRTGRSKVRAMSTRSRISGTEQKPNYFPEKLYQTAATAEEGGGVLEYELSVDAKLDYLVWLHFAEIEERVRRVGERVFDVYINDDNL TRVDIYKQVGGFAAFTWHHTVKNLSSSVLSVKLVGVVGAPLICGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 637 Download |
| MSLFHTLPIF LCIIFFTSTT TSTTLPPSSP SFPSGLSYHI DCGSPTNSTD QFNTTWLSDR 60 YFSGGATGIV SEPLRFRHGH EKTLRFFPIS SGKKNCYTIP NLPPSRYLLR TFVVYDNYDG 120 RSHPPSFDVA IAATVVFSWR SPWPQSLARD GAYADLFATI TASSEALICF YSFATDPPVV 180 SSIELFAADP ASYDAAAIGK NDSVLVNYGR LSCGSKQWGP GFSNDSDRFG RSWQSDSDFR 240 TGRSKVRAMS TRSRISGTEQ KPNYFPEKLY QTAATAEEGG GVLEYELSVD AKLDYLVWLH 300 FAEIEERVRR VGERVFDVYI NDDNLTRVDI YKQVGGFAAF TWHHTVKNLS SSVLSVKLVG 360 VVGAPLICGI ENYALVPSDP STVPEQVVAM KALKDSLRVP ERMGWNGDPC APTNWDAWEG 420 VTCRTSKNNT ALVISQIDLG SQGLKGSISD QISLLSDLVS LNLSSNLLVG EIPSGLGQKS 480 LIHLDLSNNQ LTGPIPDSMA SSSLQLVLLN GNLLEGRVPE QLYSIGVHGG AIDLSGNKGL 540 CGVPSLPDCP MFWENGKLST QGKIAIGLSC LFVFCVILLL VYIYIRRRRN DYDFALPHEL 600 TSLATKRNRY QRQKSLMVLE MESQHAKGLP SHFTTQ* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.001 | 37 | 171 | 148 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 0.001 | 413 | 496 | 92 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 0.0001 | 210 | 337 | 134 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 2.0e-43 | 40 | 341 | 315 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 1.0e-80 | 40 | 569 | 545 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG50525.1 | 0 | 31 | 609 | 23 | 550 | AC084221_7 hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_001041980.1 | 0 | 33 | 628 | 31 | 630 | Os01g0140400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_564237.2 | 0 | 31 | 631 | 23 | 622 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 28 | 631 | 21 | 621 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002524408.1 | 0 | 33 | 607 | 19 | 591 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hq1_A | 0.0000003 | 389 | 522 | 31 | 156 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3rj0_A | 0.000008 | 408 | 549 | 608 | 745 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3rj0_A | 0.00002 | 433 | 519 | 221 | 308 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
