y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma02g46400.2 |
Family | CE8 |
Protein Properties | Length: 347 Molecular Weight: 38263.9 Isoelectric Point: 5.0004 |
Chromosome | Chromosome/Scaffold: 02 Start: 50368276 End: 50370502 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 37 | 334 | 0 |
IVVDQHGKGEFRTVQAAFDSIKENNDRWVKVHINAGTYTEKVQISIYKPCIFLEGSGKEVTTITSSGFHSTSTININASSDDNSQSDNTGATCVSFPSNV IVIGITFENSFNLVGSQSIAPAPAAAIYGDKSVFFKCGFVSYQDTLFDSKGRHYFKDCYIGGEVDFIYGSGQSYYEACTINATQERSFPGFVTAQFRDSE IDTSGFVFRAGCVMGIGRVNLGRAWGPYSRVIFHGTYLSPIVSPEGWNAWDYTGQESNLTYAEVDCTGPGANTAKRVKWEKNLTGSQLNEFSLSSFIN |
Full Sequence |
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Protein Sequence Length: 347 Download |
MEMLLRPVLF PLLLFLFCSS WVEGAMDCWG NKIQHTIVVD QHGKGEFRTV QAAFDSIKEN 60 NDRWVKVHIN AGTYTEKVQI SIYKPCIFLE GSGKEVTTIT SSGFHSTSTI NINASSDDNS 120 QSDNTGATCV SFPSNVIVIG ITFENSFNLV GSQSIAPAPA AAIYGDKSVF FKCGFVSYQD 180 TLFDSKGRHY FKDCYIGGEV DFIYGSGQSY YEACTINATQ ERSFPGFVTA QFRDSEIDTS 240 GFVFRAGCVM GIGRVNLGRA WGPYSRVIFH GTYLSPIVSP EGWNAWDYTG QESNLTYAEV 300 DCTGPGANTA KRVKWEKNLT GSQLNEFSLS SFINQDGWLS YLPITF* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 5.0e-70 | 36 | 339 | 310 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 3.0e-71 | 36 | 339 | 310 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 7.0e-82 | 35 | 339 | 308 | + Probable pectinesterase | ||
PLN02176 | PLN02176 | 2.0e-85 | 31 | 346 | 322 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 5.0e-98 | 34 | 344 | 317 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO53311.1 | 0 | 26 | 252 | 1 | 213 | pectin methylesterase [Lupinus angustifolius] |
RefSeq | XP_002318946.1 | 0 | 12 | 344 | 11 | 339 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330032.1 | 0 | 1 | 344 | 1 | 324 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515255.1 | 0 | 8 | 343 | 12 | 335 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 29 | 343 | 32 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4e-35 | 37 | 346 | 9 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 7e-31 | 38 | 339 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.0000000000002 | 31 | 329 | 27 | 354 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.0000000002 | 141 | 343 | 103 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.0000000002 | 141 | 343 | 103 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |