Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma02g46880.2 |
Family | CE8 |
Protein Properties | Length: 384 Molecular Weight: 42245.5 Isoelectric Point: 4.9099 |
Chromosome | Chromosome/Scaffold: 02 Start: 50702876 End: 50706215 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 54 | 376 | 0 |
IVVDQTGNGDSTTVQGAVDMVPQNNTERVKIYIYPGIYRERVHVPKSKPFISFIGKPNITMNARGANITANAKALKNNITANANALNITEIANAIPIITN STKASDKGSDGQEMGTVSTATVWVESDFFCATALTIENLVDKDADKRQAVALRVDGDKAVFYRVKLVGEQDTLLDSTGIHYFYRSYIQGSVDFICGNAKS LFHECVLDSVAEFWGAIAAHHRDSEDEDTGFSFVNCTIKGSGSVFLGRAWGKYATTTYSYCHMDDVIFPLGWSDWGDPSRQGTAMFGEYECSGKGSNRTE RVEWSKALSSEEAMPFLSRDYIY |
Full Sequence |
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Protein Sequence Length: 384 Download |
MRLLSALVSL VLLLMKCVQV QGDTDSDHAR NFITWEDFMV DEQGITSNVG GRIIVVDQTG 60 NGDSTTVQGA VDMVPQNNTE RVKIYIYPGI YRERVHVPKS KPFISFIGKP NITMNARGAN 120 ITANAKALKN NITANANALN ITEIANAIPI ITNSTKASDK GSDGQEMGTV STATVWVESD 180 FFCATALTIE NLVDKDADKR QAVALRVDGD KAVFYRVKLV GEQDTLLDST GIHYFYRSYI 240 QGSVDFICGN AKSLFHECVL DSVAEFWGAI AAHHRDSEDE DTGFSFVNCT IKGSGSVFLG 300 RAWGKYATTT YSYCHMDDVI FPLGWSDWGD PSRQGTAMFG EYECSGKGSN RTERVEWSKA 360 LSSEEAMPFL SRDYIYGDGW LRL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 8.0e-82 | 49 | 381 | 338 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 9.0e-91 | 52 | 381 | 336 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 6.0e-98 | 53 | 382 | 333 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-101 | 52 | 383 | 336 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 4.0e-157 | 30 | 383 | 361 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE67559.1 | 0 | 54 | 383 | 75 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
RefSeq | NP_200370.1 | 0 | 4 | 383 | 3 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002264297.1 | 0 | 32 | 383 | 34 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298857.1 | 0 | 50 | 383 | 16 | 318 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522727.1 | 0 | 28 | 383 | 54 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 7e-34 | 51 | 382 | 6 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-30 | 55 | 382 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.00000000000008 | 55 | 369 | 34 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000000001 | 162 | 364 | 78 | 327 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000000001 | 162 | 364 | 78 | 327 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |