Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma02g46890.1 |
Family | CE8 |
Protein Properties | Length: 359 Molecular Weight: 39810.2 Isoelectric Point: 9.7719 |
Chromosome | Chromosome/Scaffold: 02 Start: 50710145 End: 50713416 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 60 | 352 | 0 |
IIVNQNGGGHSKTVQGAVNMVPDNNTQRVKIYIYPGIYREKVYVPVTKPYVSFIGKTNQTASPVITWNSKSSDIGPNGTALGTYASATVGVDSNYFCATG VTFENSVITSAGGKGMQGVALRVSSPKAMFYRVRIKGSQDTLLDNIGNHYFFKCHIIGKVDFICGRAKSLYEKCRLQSIAENYGAIAAHHRDSPTEDTGF SFVGCSIRGSGSVYLGRAWGNYSRIIYSKCNMDGIINPQGWSDWNRSHRKKTAVFAEYQCKGRGAERRHRVPWSKSFSYHEASPFLYKSFIDG |
Full Sequence |
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Protein Sequence Length: 359 Download |
MMMGLVSSRV VFLFVVSVLV IWAQVDLAEG GGVRNYISWE DLQVDEQRLA VNSHNNVRVI 60 IVNQNGGGHS KTVQGAVNMV PDNNTQRVKI YIYPGIYREK VYVPVTKPYV SFIGKTNQTA 120 SPVITWNSKS SDIGPNGTAL GTYASATVGV DSNYFCATGV TFENSVITSA GGKGMQGVAL 180 RVSSPKAMFY RVRIKGSQDT LLDNIGNHYF FKCHIIGKVD FICGRAKSLY EKCRLQSIAE 240 NYGAIAAHHR DSPTEDTGFS FVGCSIRGSG SVYLGRAWGN YSRIIYSKCN MDGIINPQGW 300 SDWNRSHRKK TAVFAEYQCK GRGAERRHRV PWSKSFSYHE ASPFLYKSFI DGDQWLRL* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 3.0e-98 | 56 | 356 | 306 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 7.0e-99 | 57 | 356 | 302 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 2.0e-102 | 59 | 357 | 299 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 8.0e-112 | 58 | 358 | 304 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 6.0e-177 | 34 | 358 | 328 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE67559.1 | 0 | 36 | 358 | 33 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
RefSeq | NP_200370.1 | 0 | 33 | 358 | 35 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002264297.1 | 0 | 36 | 358 | 34 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298857.1 | 0 | 55 | 358 | 15 | 318 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522727.1 | 0 | 6 | 358 | 31 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.99965e-42 | 60 | 357 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8e-36 | 61 | 357 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.00000000000006 | 67 | 278 | 41 | 269 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000002 | 59 | 237 | 7 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000002 | 59 | 237 | 7 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |