Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma03g00626.1 |
Family | GH51 |
Protein Properties | Length: 644 Molecular Weight: 71315.3 Isoelectric Point: 5.7691 |
Chromosome | Chromosome/Scaffold: 03 Start: 350239 End: 354026 |
Description | alpha-L-arabinofuranosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 198 | 640 | 0 |
TNRNASLQITTSNTGVVWLDQVSVMPLDTFKGHGYRKDLFQMVADLKPKFFRFPGGCYVEGNYLRNAFRWKDTVGPWEERPGHFNDVWNYWTDDGFGFFE GLQFAEDVGALPAWVFNNGLSLKDEVNTSAIAPFIQEALDGIEFARGSPKSQWGSLRASMGHPEPFDLRIVAIGNEECGMSKYQANYLKFHTAIKQAYPD IQIITNCDGSEKPLDHPADLYDFHIYTNAKDMFSKSTKFDDAPRSGPKAFVSEYAVWKDDAGNGTLLAAVAEAAFLIGLERNSDVVHMVSYAPLFVNTND RRWTPDAIVFDSHQHYGTPSYWVQHLFSASSGATLLNTTLQNSTDSLVASAIEYTNPEDKKNYLKIKVVNFGSDPQNFRFFISGLASNVQRSGAAKTVLT GPNVKEENSFSEPKRVAPQHTSLEVAHGDMNVVLSPYSVTSFD |
Full Sequence |
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Protein Sequence Length: 644 Download |
MSLSIKIFFL LYLSCLTVSC FAEQTSTLIV DAKGSVRKIP DTFFGAFFEE INHAGAGGLW 60 AELVRNRGFE AGGPNVPSDI YPWSIIGDDS TILVSTDRSS CFERNKIALR MNVLCNQSNP 120 CPAGGVGISN PGFWGMNIEK GQKYKAVFYV KARGGLDLDV SFVGSERGEK LASQNFRAPG 180 HNISMWTKME TILEANDTNR NASLQITTSN TGVVWLDQVS VMPLDTFKGH GYRKDLFQMV 240 ADLKPKFFRF PGGCYVEGNY LRNAFRWKDT VGPWEERPGH FNDVWNYWTD DGFGFFEGLQ 300 FAEDVGALPA WVFNNGLSLK DEVNTSAIAP FIQEALDGIE FARGSPKSQW GSLRASMGHP 360 EPFDLRIVAI GNEECGMSKY QANYLKFHTA IKQAYPDIQI ITNCDGSEKP LDHPADLYDF 420 HIYTNAKDMF SKSTKFDDAP RSGPKAFVSE YAVWKDDAGN GTLLAAVAEA AFLIGLERNS 480 DVVHMVSYAP LFVNTNDRRW TPDAIVFDSH QHYGTPSYWV QHLFSASSGA TLLNTTLQNS 540 TDSLVASAIE YTNPEDKKNY LKIKVVNFGS DPQNFRFFIS GLASNVQRSG AAKTVLTGPN 600 VKEENSFSEP KRVAPQHTSL EVAHGDMNVV LSPYSVTSFD ILK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3534 | AbfA | 9.0e-37 | 231 | 636 | 483 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
pfam06964 | Alpha-L-AF_C | 1.0e-44 | 449 | 635 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
smart00813 | Alpha-L-AF_C | 7.0e-51 | 449 | 635 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
Gene Ontology | |
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GO Term | Description |
GO:0046373 | L-arabinose metabolic process |
GO:0046556 | alpha-N-arabinofuranosidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP97437.1 | 0 | 15 | 642 | 23 | 655 | alpha-L-arabinofuranosidase [Malus x domestica] |
GenBank | ABV08815.1 | 0 | 20 | 642 | 16 | 645 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
DDBJ | BAC99303.1 | 0 | 4 | 642 | 6 | 654 | alpha-L-arabinofuranosidase [Pyrus pyrifolia] |
DDBJ | BAF42035.1 | 0 | 4 | 642 | 6 | 655 | alpha-Arabinosidase1 [Pyrus communis] |
RefSeq | XP_002523672.1 | 0 | 15 | 642 | 29 | 659 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s2c_L | 2e-23 | 231 | 641 | 48 | 481 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_K | 2e-23 | 231 | 641 | 48 | 481 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_J | 2e-23 | 231 | 641 | 48 | 481 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_I | 2e-23 | 231 | 641 | 48 | 481 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_H | 2e-23 | 231 | 641 | 48 | 481 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |