Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma03g00633.1 |
Family | GH51 |
Protein Properties | Length: 622 Molecular Weight: 69121.6 Isoelectric Point: 5.7735 |
Chromosome | Chromosome/Scaffold: 03 Start: 358214 End: 362077 |
Description | alpha-L-arabinofuranosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 188 | 617 | 0 |
GFVWLDQVSAMPLDTYKGHGFRKDLFQMVADLKPKFFRFPGGCYVEGDYLRNAFRWKDTVGPWEERPGHYGDVWNYWSDDGFGFFEGLQLAEDLGALPVW VFNNGISHHDEVNTSAIAPFVHEALDGIEFARGSPESRWGSLRASMGHPKPFDLRIVAIGNEDCDKFNYKGNYLKFYDAIRRVYPDIQIISNCDGSENPL DHPADLYDFHIYTNAEDMFSKSTKFDNVSRYGPKAFVSEYAVWQDDAGNGTLLAAVAEAAFLIGLEKNSDIVSMVSYAPLFVNANDRKWTPDAIAFDSYR HYETPSYWVQCLFIPSSGATLLNSTLLSSSNKSLAASAIEYTNPANKKNYLRIKVVNFGDHTENLRIFVNGLDSKVQQSGSTKIVLTAPNVREENSFSEP KKIVPQHTSLEAASEDMNVILSPYSVTSFD |
Full Sequence |
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Protein Sequence Length: 622 Download |
QTSTLIIDAI ATRKIPDTFL GAFFEEINHA GAGGLWAELV RNRGFEAGGS NVPSNIYPWS 60 IIGDDSTILV STDRTSSFER NKVALSMKVL CNESNPCPSG GVGISNPGYW GMNIEKGKKY 120 KVVFYAKADG AINLNVSFVG TEKGEKLASN NIRSYKHNVT NWTRMEVIIE AKATNHNASL 180 QITTSKSGFV WLDQVSAMPL DTYKGHGFRK DLFQMVADLK PKFFRFPGGC YVEGDYLRNA 240 FRWKDTVGPW EERPGHYGDV WNYWSDDGFG FFEGLQLAED LGALPVWVFN NGISHHDEVN 300 TSAIAPFVHE ALDGIEFARG SPESRWGSLR ASMGHPKPFD LRIVAIGNED CDKFNYKGNY 360 LKFYDAIRRV YPDIQIISNC DGSENPLDHP ADLYDFHIYT NAEDMFSKST KFDNVSRYGP 420 KAFVSEYAVW QDDAGNGTLL AAVAEAAFLI GLEKNSDIVS MVSYAPLFVN ANDRKWTPDA 480 IAFDSYRHYE TPSYWVQCLF IPSSGATLLN STLLSSSNKS LAASAIEYTN PANKKNYLRI 540 KVVNFGDHTE NLRIFVNGLD SKVQQSGSTK IVLTAPNVRE ENSFSEPKKI VPQHTSLEAA 600 SEDMNVILSP YSVTSFDLLI K* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06964 | Alpha-L-AF_C | 3.0e-29 | 425 | 612 | 206 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
COG3534 | AbfA | 4.0e-35 | 207 | 613 | 480 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
smart00813 | Alpha-L-AF_C | 1.0e-36 | 425 | 612 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
Gene Ontology | |
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GO Term | Description |
GO:0046373 | L-arabinose metabolic process |
GO:0046556 | alpha-N-arabinofuranosidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP97437.1 | 0 | 1 | 621 | 32 | 657 | alpha-L-arabinofuranosidase [Malus x domestica] |
GenBank | ABV08815.1 | 0 | 1 | 621 | 22 | 647 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
GenBank | ABV32544.1 | 0 | 1 | 621 | 32 | 660 | alpha-L-arabinofuranosidase protein [Prunus persica] |
DDBJ | BAF42035.1 | 0 | 1 | 621 | 32 | 657 | alpha-Arabinosidase1 [Pyrus communis] |
RefSeq | XP_002523672.1 | 0 | 2 | 621 | 39 | 661 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s2c_L | 2e-20 | 206 | 587 | 47 | 451 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_K | 2e-20 | 206 | 587 | 47 | 451 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_J | 2e-20 | 206 | 587 | 47 | 451 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_I | 2e-20 | 206 | 587 | 47 | 451 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_H | 2e-20 | 206 | 587 | 47 | 451 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO852683 | 414 | 207 | 618 | 0 |
HO807291 | 316 | 114 | 429 | 0 |
HO780740 | 386 | 235 | 619 | 0 |
GT046204 | 309 | 192 | 500 | 0 |
JG577027 | 334 | 63 | 396 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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