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Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma03g17300.1 |
Family | AA5 |
Protein Properties | Length: 540 Molecular Weight: 59078.6 Isoelectric Point: 6.2339 |
Chromosome | Chromosome/Scaffold: 03 Start: 21896280 End: 21898584 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 18 | 538 | 0 |
ARADLPGTWELLVPDAGIASMHTAVTRFNTVVLLDRTNIGPSRKLLPKGHCRSDKNDAVLKLDCYAHSVHLDLATNQIRPLKILTDTWCSSGQFLPDGTL LQTGGDLDGLKKIRKFSPCDVSSSSSLHSPCDWEELDDIELAEGRWYATNQILPDGSVIIIGGRGSNTVEFFPPKRNGAVSFPFLSETEDTQMDNLYPYV HLLPNGHLFVFANTRSVMYDFNRHVIVKEYPKLHGGPRNYPSAGSSAMLALQGNYSKAEIVVCGGAKYGAFLLRSTDTPAHGSCGRILAMEEKPRWEMED MPYGRIMGDMVMLPTGDVLVINGAMSGTQGFEMASDPCLNPVLYRPDQPVGLRFMVLNPGTVPRMYHATANLLPDARVLLAGSNPHVLYRFDDVEFPTEL RLEAFSPEYLSADRANLRPVIEEVPQTVRFGGKFDVVVSVDLPVVGIVEVNLASAPFATHSFSQGQRLVKLTVSSAVPDGSDGRYRIGVTAPPSGAVAPP GYYMAFAVNQGVPSIAKWIHV |
Full Sequence |
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Protein Sequence Length: 540 Download |
MENLSYFLFL LFLFATHARA DLPGTWELLV PDAGIASMHT AVTRFNTVVL LDRTNIGPSR 60 KLLPKGHCRS DKNDAVLKLD CYAHSVHLDL ATNQIRPLKI LTDTWCSSGQ FLPDGTLLQT 120 GGDLDGLKKI RKFSPCDVSS SSSLHSPCDW EELDDIELAE GRWYATNQIL PDGSVIIIGG 180 RGSNTVEFFP PKRNGAVSFP FLSETEDTQM DNLYPYVHLL PNGHLFVFAN TRSVMYDFNR 240 HVIVKEYPKL HGGPRNYPSA GSSAMLALQG NYSKAEIVVC GGAKYGAFLL RSTDTPAHGS 300 CGRILAMEEK PRWEMEDMPY GRIMGDMVML PTGDVLVING AMSGTQGFEM ASDPCLNPVL 360 YRPDQPVGLR FMVLNPGTVP RMYHATANLL PDARVLLAGS NPHVLYRFDD VEFPTELRLE 420 AFSPEYLSAD RANLRPVIEE VPQTVRFGGK FDVVVSVDLP VVGIVEVNLA SAPFATHSFS 480 QGQRLVKLTV SSAVPDGSDG RYRIGVTAPP SGAVAPPGYY MAFAVNQGVP SIAKWIHVS* 540 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 1.0e-26 | 435 | 538 | 105 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-31 | 432 | 538 | 108 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 8.0e-110 | 38 | 282 | 250 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA42922.1 | 0 | 15 | 538 | 6 | 521 | glyoxal oxidase [Vitis pseudoreticulata] |
GenBank | ACV49898.1 | 0 | 15 | 538 | 6 | 521 | glyoxal oxidase [Vitis vinifera] |
GenBank | ACV49899.1 | 0 | 15 | 538 | 6 | 521 | glyoxal oxidase [Vitis vinifera] |
RefSeq | XP_002274763.1 | 0 | 7 | 538 | 17 | 540 | PREDICTED: similar to glyoxal oxidase [Vitis vinifera] |
RefSeq | XP_002322929.1 | 0 | 4 | 538 | 1 | 526 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eid_A | 1e-19 | 101 | 539 | 203 | 638 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 1t2x_A | 1e-18 | 101 | 539 | 203 | 638 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2vz3_A | 1e-18 | 101 | 539 | 203 | 638 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2vz1_A | 1e-18 | 101 | 539 | 203 | 638 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2jkx_A | 1e-18 | 101 | 539 | 203 | 638 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |