| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma03g32220.2 |
| Family | AA3 |
| Protein Properties | Length: 478 Molecular Weight: 51697.6 Isoelectric Point: 5.3968 |
| Chromosome | Chromosome/Scaffold: 03 Start: 40018961 End: 40021822 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 43 | 473 | 7.6e-27 |
| PSLPLNKDTSQDQALSDFYNTSASQQPFPDEAARSGVVVKSLTEKGLEVTEDKRQNLYKVKCDVVIMGSGCDGGVAAAVLANSAHKKGEYFVSHDYSSLE GPFMDELYESGGIMPSLDGKMMILAGSTVGGGSAVNRSASIRTPDSVLREWSKKYKIPLFASSDYQSAMESVCRRIGVTEKCKKESFQDQILIQGCEKMS SKVDSVAINSSEDHYCGSCCYGCRTGDKKGTDSTWLVDAVGNGAVILTGGIITSIHKEYAVDSTPRFIIETLSLGPGSFLAFVPWLSGEVKAEGRVTYRL DQADKESLRVGLRMALRILVAAGAVEVGTYRSDGQRIKEEELEEFLDTVTIVGGPKSRNEVWTVFATAHQMTSCRMVATEEEGALDENGESWEAKGLYVC DGSVLPSAVGVNPMVTIQSTSYCIATKIAES | |||
| Full Sequence |
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| Protein Sequence Length: 478 Download |
| MEGRESRHPL LRGGRKREEK SYKHVLSTTQ MHVMAAICDA LIPSLPLNKD TSQDQALSDF 60 YNTSASQQPF PDEAARSGVV VKSLTEKGLE VTEDKRQNLY KVKCDVVIMG SGCDGGVAAA 120 VLANSAHKKG EYFVSHDYSS LEGPFMDELY ESGGIMPSLD GKMMILAGST VGGGSAVNRS 180 ASIRTPDSVL REWSKKYKIP LFASSDYQSA MESVCRRIGV TEKCKKESFQ DQILIQGCEK 240 MSSKVDSVAI NSSEDHYCGS CCYGCRTGDK KGTDSTWLVD AVGNGAVILT GGIITSIHKE 300 YAVDSTPRFI IETLSLGPGS FLAFVPWLSG EVKAEGRVTY RLDQADKESL RVGLRMALRI 360 LVAAGAVEVG TYRSDGQRIK EEELEEFLDT VTIVGGPKSR NEVWTVFATA HQMTSCRMVA 420 TEEEGALDEN GESWEAKGLY VCDGSVLPSA VGVNPMVTIQ STSYCIATKI AESLSKP* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.002 | 329 | 459 | 135 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| COG2303 | BetA | 9.0e-5 | 103 | 300 | 231 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| COG2303 | BetA | 2.0e-9 | 408 | 472 | 65 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 6.0e-18 | 337 | 460 | 124 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| pfam00732 | GMC_oxred_N | 1.0e-56 | 146 | 291 | 147 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 2e-23 | 22 | 75 | 1 | 54 | alcohol oxidase [Glycine max] |
| GenBank | ACF22878.1 | 0 | 80 | 291 | 188 | 404 | alcohol oxidase [Glycine max] |
| GenBank | ACF22878.1 | 0 | 291 | 476 | 502 | 718 | alcohol oxidase [Glycine max] |
| EMBL | CAP15763.1 | 0 | 80 | 291 | 215 | 431 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| EMBL | CAP15763.1 | 0 | 291 | 476 | 530 | 748 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.004 | 426 | 473 | 457 | 504 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1coy_A | 0.004 | 426 | 473 | 457 | 504 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1b8s_A | 0.008 | 426 | 461 | 452 | 487 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 3b3r_A | 0.009 | 426 | 461 | 454 | 489 | A Chain A, Crystal Structure Of Streptomyces Cholesterol Oxidase H447qE361Q Mutant Bound To Glycerol (0.98a) |
| PDB | 1cc2_A | 0.009 | 426 | 461 | 452 | 487 | A Chain A, Cholesterol Oxidase From Streptomyces His447gln Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES758194 | 212 | 80 | 286 | 0 |
| GR997821 | 217 | 80 | 291 | 0 |
| DY810366 | 217 | 80 | 291 | 0 |
| CO117306 | 245 | 61 | 290 | 0 |
| DW483573 | 215 | 81 | 290 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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