y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma03g34670.1 |
Family | GT47 |
Protein Properties | Length: 535 Molecular Weight: 60058.3 Isoelectric Point: 7.7251 |
Chromosome | Chromosome/Scaffold: 03 Start: 42021485 End: 42025499 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 202 | 483 | 0 |
EKQFKVFVYEEGEPPVFHNGPCKSIYSMEGNFIHAIEMNDQFRTRDPEKAHVFFLPFSVAMLVQFVYVRDSHDFGPIKKTVTDYVNVIAGRYPYWNRSLG ADHFYLACHDWGPETSRSIPNLNENSIRVLCNANTSEGFKPSKDVSFPEINLQTGSINGFIGGPSASGRPLLAFFAGGLHGPIRPVLLEHWENRDEDIQV HKYLPKGVSYYEMLRKSRFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFNDVLNWKSFSVEVSVKDIPRLKEILLSI |
Full Sequence |
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Protein Sequence Length: 535 Download |
MGGVRWGQES SSSMKLLLFM VPLVLVAGLV FILGPNPSSW VSFANAPVLL GGSVITSSSS 60 TSSGAVTVTD PSEAKQREGL VVVAVENRGG EKAISDDTDF NHSSTPPFSV QAIQTPQQPD 120 EQNVSQLSPN VTPVNESYVP PERPKLQRKL SILDRTEAGL IQARAAISEA RNGNQTQDKD 180 YVPVGPMYNN ANAFHRSYLE MEKQFKVFVY EEGEPPVFHN GPCKSIYSME GNFIHAIEMN 240 DQFRTRDPEK AHVFFLPFSV AMLVQFVYVR DSHDFGPIKK TVTDYVNVIA GRYPYWNRSL 300 GADHFYLACH DWGPETSRSI PNLNENSIRV LCNANTSEGF KPSKDVSFPE INLQTGSING 360 FIGGPSASGR PLLAFFAGGL HGPIRPVLLE HWENRDEDIQ VHKYLPKGVS YYEMLRKSRF 420 CLCPSGYEVA SPRVVEAIYT GCVPVLISDH YVPPFNDVLN WKSFSVEVSV KDIPRLKEIL 480 LSISPRHYIR MQRRVGLVRR HFEVHSPPKR YDVFHMILHS VWLRRLNFRV HHDQ* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-67 | 201 | 483 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08605.1 | 0 | 123 | 530 | 3 | 405 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_001031828.1 | 0 | 104 | 530 | 86 | 515 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002284018.1 | 0 | 201 | 532 | 1 | 332 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326234.1 | 0 | 201 | 527 | 1 | 327 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528630.1 | 0 | 174 | 534 | 209 | 569 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |