PlantCAZyme

Basic Information
Species	Glycine max
Cazyme ID	Glyma03g38750.2
Family	CE8
Protein Properties	Length: 503 Molecular Weight: 56317.7 Isoelectric Point: 8.3859
Chromosome	Chromosome/Scaffold: 03 Start: 45050953 End: 45053147
Description	Plant invertase/pectin methylesterase inhibitor superfamily
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
CE8	207	451	0
NVVVAQYGRRHLSTIADSVLNACPKNKTIACVIYVKRGKYEKRVVIPKGVNQVFMYGDGPAHTIVTDSNTRDPKTLTTSFRAATFVVMGKGFICKDMGFT APADIGGAPTLLVLSDHSAFFNCKIDGNEGTLLAVAQRQFYRDCEILGRVTQNSHIIVKPRNSSDLVLRRNVVSAQSRLDKHQTTGLVIQNYTITAHGQN MNTLNATTYLRSPYSEYSRTIIMESFIGDVIHPKGWCKWSDNAIE

Full Sequence
Protein Sequence Length: 503 Download
MDDDSKEKER LTFNIAIMVA SMIAIAMVTV SVVAHTDGPK QDAGKNVKTL LSVCSKTEDP 60 ESCFRMLKHV GEKATVLKAA INATLTELLL QESYKDCLEL LSLGIEELQS LYFVASFHVE 120 LCKLNLDDVM NSLSAVISYE VLGYSLKVPV LLTRIALSIV HNFSERPNRR EARLMLEEFP 180 RWFPATERKM IESNQGDNGG GEQWPINVVV AQYGRRHLST IADSVLNACP KNKTIACVIY 240 VKRGKYEKRV VIPKGVNQVF MYGDGPAHTI VTDSNTRDPK TLTTSFRAAT FVVMGKGFIC 300 KDMGFTAPAD IGGAPTLLVL SDHSAFFNCK IDGNEGTLLA VAQRQFYRDC EILGRVTQNS 360 HIIVKPRNSS DLVLRRNVVS AQSRLDKHQT TGLVIQNYTI TAHGQNMNTL NATTYLRSPY 420 SEYSRTIIME SFIGDVIHPK GWCKWSDNAI ETRTDKRVKW NGYSTIFERD QMVSYTVGRF 480 VQTDQWLLNR GIPYEIGFLV QN*

Full Sequence

Protein Sequence Length: 503 Download

MDDDSKEKER LTFNIAIMVA SMIAIAMVTV SVVAHTDGPK QDAGKNVKTL LSVCSKTEDP    60
ESCFRMLKHV GEKATVLKAA INATLTELLL QESYKDCLEL LSLGIEELQS LYFVASFHVE    120
LCKLNLDDVM NSLSAVISYE VLGYSLKVPV LLTRIALSIV HNFSERPNRR EARLMLEEFP    180
RWFPATERKM IESNQGDNGG GEQWPINVVV AQYGRRHLST IADSVLNACP KNKTIACVIY    240
VKRGKYEKRV VIPKGVNQVF MYGDGPAHTI VTDSNTRDPK TLTTSFRAAT FVVMGKGFIC    300
KDMGFTAPAD IGGAPTLLVL SDHSAFFNCK IDGNEGTLLA VAQRQFYRDC EILGRVTQNS    360
HIIVKPRNSS DLVLRRNVVS AQSRLDKHQT TGLVIQNYTI TAHGQNMNTL NATTYLRSPY    420
SEYSRTIIME SFIGDVIHPK GWCKWSDNAI ETRTDKRVKW NGYSTIFERD QMVSYTVGRF    480
VQTDQWLLNR GIPYEIGFLV QN* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
PLN02314	PLN02314	5.0e-62	178	495	346	+ pectinesterase
PLN02217	PLN02217	4.0e-62	2	502	575	+ probable pectinesterase/pectinesterase inhibitor
PLN02468	PLN02468	3.0e-66	39	498	531	+ putative pectinesterase/pectinesterase inhibitor
PLN02745	PLN02745	3.0e-77	31	497	550	+ Putative pectinesterase/pectinesterase inhibitor
pfam01095	Pectinesterase	4.0e-83	207	484	306	+ Pectinesterase.

Gene Ontology
GO Term	Description
GO:0005618	cell wall
GO:0030599	pectinesterase activity
GO:0042545	cell wall modification

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
EMBL	CBI26012.1	0	36	498	36	567	unnamed protein product [Vitis vinifera]
RefSeq	XP_002274176.1	0	46	498	43	563	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002275000.1	0	36	498	36	567	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002519324.1	0	52	498	54	567	Pectinesterase-3 precursor, putative [Ricinus communis]
RefSeq	XP_002528621.1	0	41	498	40	566	Pectinesterase-4 precursor, putative [Ricinus communis]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1xg2_A	0	207	498	4	315	B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB	1gq8_A	6.99949e-42	207	498	8	319	A Chain A, Pectin Methylesterase From Carrot

Metabolic Pathways
Pathway Name	Reaction	EC	Protein Name
homogalacturonan degradation	RXN-2102	EC-3.1.1.11	pectinesterase

Transmembrane Domains

Start	End
13	35

EST Download unfiltered results here

Hit	Length	Start	End	EValue
GR194961	279	238	487	0
DY918939	293	238	497	0
DY918231	293	238	497	0
DT754529	290	238	498	0
DY918427	288	243	497	0

Orthologous Group
Species	ID
Glycine max	Glyma19g41350.1
Medicago truncatula	Medtr7g111560.1

CAZyme Information